RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	SEMG1	P04279	462 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	ANXA4	P09525	319 aa	Predicted RBP	13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	KDELR2	P33947	212 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	HOXD12	P35452	270 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	PNLIPRP1	P54315	467 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	MVK	Q03426	396 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	RPA4	Q13156	261 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	CDK5R2	Q13319	367 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	E2F2	Q14209	437 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	NFE2L1	Q14494	772 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZNF658B	Q4V348	819 aa	Predicted RBP	13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	CPTP	Q5TA50	214 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR2T5	Q6IEZ7	315 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	MFSD4A	Q8N468	514 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	SVOP	Q8N4V2	548 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR7G3	Q8NG95	312 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR2T29	Q8NH02	315 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	MAFA	Q8NHW3	353 aa	Predicted RBP	13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	SH3KBP1	Q96B97	665 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	APOO	Q9BUR5	198 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	BTBD3	Q9Y2F9	522 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	KCNE2	Q9Y6J6	123 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	GABRR3	A8MPY1	467 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	AGXT	P21549	392 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	TGM1	P22735	817 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	KEL	P23276	732 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	ACVR2A	P27037	513 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	IGFALS	P35858	605 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZP2	Q05996	745 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	BCL2A1	Q16548	175 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	SPIN4	Q56A73	249 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	ANXA8L1	Q5VT79	327 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	SLCO4C1	Q6ZQN7	724 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	CAMKMT	Q7Z624	323 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	ADCK1	Q86TW2	530 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	SIX5	Q8N196	739 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR6Q1	Q8NGQ2	317 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	HUS1B	Q8NHY5	278 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	YIPF6	Q96EC8	236 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	SPATA9	Q9BWV2	254 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	CCNB1IP1	Q9NPC3	277 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	SCN3B	Q9NY72	215 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	ABCG2	Q9UNQ0	655 aa		13.28	□□□□□ -0.28
COPS7B-223	ENST00000611614	C1orf105	O95561	183 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	FABP3	P05413	133 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	HNRNPA2B1	P22626	353 aa	Known RBP	13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	AKT2	P31751	481 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	ARHGDIA	P52565	204 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	STARD6	P59095	220 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	KEAP1	Q14145	624 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	ADNP2	Q6IQ32	1131 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	MED27	Q6P2C8	311 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	CBLL1	Q75N03	491 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	EIF3M	Q7L2H7	374 aa	Known RBP	13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	VPS37A	Q8NEZ2	397 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	REPS1	Q96D71	796 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	TPT1P8	Q9HAU6	139 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	PRM3	Q9NNZ6	103 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	USP36	Q9P275	1121 aa	Known RBP	13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	GULP1	Q9UBP9	304 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	NUMA1	Q14980	2115 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	SH3BGRL	O75368	114 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	ANGPTL1	O95841	491 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	RPN2	P04844	631 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	PPIB	P23284	216 aa	Known RBP	13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	IGFBP5	P24593	272 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	EMX1	Q04741	257 aa	Predicted RBP	13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	VEZF1	Q14119	521 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	INA	Q16352	499 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	HKDC1	Q2TB90	917 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	SYT6	Q5T7P8	510 aa	Predicted RBP	13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	PLEKHG7	Q6ZR37	379 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	LACC1	Q8IV20	430 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	ZNF480	Q8WV37	535 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	NEIL2	Q969S2	332 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	CCDC90B	Q9GZT6	254 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	DUSP21	Q9H596	190 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	EPS8L2	Q9H6S3	715 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	CD93	Q9NPY3	652 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	CYP8B1	Q9UNU6	501 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	CORO2B	Q9UQ03	480 aa		13.27	□□□□□ -0.29
COPS7B-223	ENST00000611614	ZNF217	O75362	1048 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	NADK	O95544	446 aa	Predicted RBP	13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	IDS	P22304	550 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	TIA1	P31483	386 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	DNAJA1	P31689	397 aa	Known RBP	13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	RPS13	P62277	151 aa	Known RBP	13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	TMEM31	Q5JXX7	168 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	PERM1	Q5SV97	790 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	CEP68	Q76N32	757 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	C11orf96	Q7Z7L8	435 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	TMPRSS11B	Q86T26	416 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	P2RY8	Q86VZ1	359 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	CYP4Z1	Q86W10	505 aa		13.26	□□□□□ -0.29
COPS7B-223	ENST00000611614	CADM3	Q8N126	398 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms