RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FANCEQ9HB96 536 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 MRPS30Q9NP92 439 aaKnown RBP12.98□□□□□ -0.33
NEK3-205ENST00000610828 TEX10Q9NXF1 929 aaPredicted RBP12.98□□□□□ -0.33
NEK3-205ENST00000610828 CLDND1Q9NY35 253 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 TESMINQ9Y4I5 508 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 POM121BA6NF01 834 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 PPM1DO15297 605 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 ABCB7O75027 752 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 JRKO75564 520 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 RYKP34925 604 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 CLDN2P57739 230 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 RPS26P62854 115 aaKnown RBP12.97□□□□□ -0.33
NEK3-205ENST00000610828 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
NEK3-205ENST00000610828 ZNF630Q2M218 657 aaPredicted RBP12.97□□□□□ -0.33
NEK3-205ENST00000610828 IFI44LQ53G44 452 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 LAIR2Q6ISS4 152 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 TTC29Q8NA56 475 aaPredicted RBP12.97□□□□□ -0.33
NEK3-205ENST00000610828 BPIFB6Q8NFQ5 453 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 C12orf43Q96C57 262 aaKnown RBP12.97□□□□□ -0.33
NEK3-205ENST00000610828 NDUFAF4Q9P032 175 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 WBP11Q9Y2W2 641 aaKnown RBP12.97□□□□□ -0.33
NEK3-205ENST00000610828 PCDHGB3Q9Y5G1 929 aa12.97□□□□□ -0.33
NEK3-205ENST00000610828 PTGES3LE9PB15 166 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 SLC1A7O00341 560 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 CPNE6O95741 557 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 ARAFP10398 606 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 GRK3P35626 688 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 SSR2P43308 183 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 RXRGP48443 463 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 CLK3P49761 638 aaKnown RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 DSTNP60981 165 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 RPE65Q16518 533 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 CEACAM20Q6UY09 585 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 UBE3DQ7Z6J8 389 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 TSEN54Q7Z6J9 526 aaKnown RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 AMER3Q8N944 861 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 SMYD1Q8NB12 490 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 SETD9Q8NE22 299 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 OR5P2Q8WZ92 322 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 EPYCQ99645 322 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 MACROD1Q9BQ69 325 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 MVB12BQ9H7P6 319 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 PREBQ9HCU5 417 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 SCHIP1Q9P0W5 487 aaPredicted RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 PNMA8BQ9ULN7 279 aaPredicted RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 GMPPBQ9Y5P6 360 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 MYO10Q9HD67 2058 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 PRSS38A1L453 326 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 LRIT2A6NDA9 550 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 PRR19A6NJB7 356 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 AXIN1O15169 862 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 SH3BP5O60239 455 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 DPM1O60762 260 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 KCNJ13O60928 360 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 CLEC3AO75596 197 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 HOXB3P14651 431 aaPredicted RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 EPHA2P29317 976 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 EEF1A2Q05639 463 aaKnown RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 PIGFQ07326 219 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 CDK5R2Q13319 367 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 HTR4Q13639 388 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 OR4C11Q6IEV9 310 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 TNFAIP8L2Q6P589 184 aaPredicted RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 RD3Q7Z3Z2 195 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 SPARTQ8N0X7 666 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 TMEM145Q8NBT3 493 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 CREB3L4Q8TEY5 395 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 JPH3Q8WXH2 748 aaPredicted RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 TEFMQ96QE5 360 aaKnown RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 FBRSQ9HAH7 460 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 NEUROD4Q9HD90 331 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 CD93Q9NPY3 652 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 AASSQ9UDR5 926 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 RAB23Q9ULC3 237 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 ANGPT4Q9Y264 503 aa12.96□□□□□ -0.33
NEK3-205ENST00000610828 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.96□□□□□ -0.33
NEK3-205ENST00000610828 H0Y8X5 98 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ZNF701M0R085 212 aaPredicted RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 TNFRSF11BO00300 401 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ADAMDEC1O15204 470 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ANGPTL1O95841 491 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 IFNA14P01570 189 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ACADMP11310 421 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 BCL6P41182 706 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 GABARAPL2P60520 117 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 TOP3AQ13472 1001 aaPredicted RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 KEAP1Q14145 624 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 SPDYE7PQ495Y7 208 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 CRB2Q5IJ48 1285 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 XAF1Q6GPH4 301 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 CCDC80Q76M96 950 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 TTLQ8NG68 377 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 OR52J3Q8NH60 311 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 UCN3Q969E3 161 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 PDXPQ96GD0 296 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 TUBA1CQ9BQE3 449 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 DCUN1D5Q9BTE7 237 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 EPS8L2Q9H6S3 715 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 NCKAP1Q9Y2A7 1128 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 CA5BQ9Y2D0 317 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms