RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 HBEGFQ99075 208 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 NPAS2Q99743 824 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 MRPL57Q9BQC6 102 aaKnown RBP13.57□□□□□ -0.24
HDDC2-204ENST00000608295 HES7Q9BYE0 225 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 SLC29A3Q9BZD2 475 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 ZBTB26Q9HCK0 441 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 PRDM7Q9NQW5 492 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 DAPP1Q9UN19 280 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 TNPO3Q9Y5L0 923 aaKnown RBP13.57□□□□□ -0.24
HDDC2-204ENST00000608295 ESPL1Q14674 2120 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 IQANK1A0A1B0GTG1 560 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 A0A1W2PPM1 405 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 PPP6CO00743 305 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 PLPP1O14494 284 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 CYC1P08574 325 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 PYGBP11216 843 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 ICAM2P13598 275 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 HIST1H1TP22492 207 aaPredicted RBP13.56□□□□□ -0.24
HDDC2-204ENST00000608295 CPN2P22792 545 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 HPDP32754 393 aaPredicted RBP13.56□□□□□ -0.24
HDDC2-204ENST00000608295 CASP2P42575 452 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 PHEXP78562 749 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 OC90Q02509 493 aaPredicted RBP13.56□□□□□ -0.24
HDDC2-204ENST00000608295 TRAF3Q13114 568 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 EIF2S3LQ2VIR3 472 aaKnown RBP13.56□□□□□ -0.24
HDDC2-204ENST00000608295 AP5B1Q2VPB7 878 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 ACER2Q5QJU3 275 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 SCUBE1Q8IWY4 988 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 OR4N5Q8IXE1 308 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 OR4F6Q8NGB9 312 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 CMTM7Q96FZ5 175 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 LMF1Q96S06 567 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 CDCP1Q9H5V8 836 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 ANKZF1Q9H8Y5 726 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 LIN28AQ9H9Z2 209 aaKnown RBP13.56□□□□□ -0.24
HDDC2-204ENST00000608295 STMN3Q9NZ72 180 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 TEKT2Q9UIF3 430 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 MRPS33Q9Y291 106 aaKnown RBP13.56□□□□□ -0.24
HDDC2-204ENST00000608295 RP1L1Q8IWN7 2480 aaPredicted RBP13.56□□□□□ -0.24
HDDC2-204ENST00000608295 RELNP78509 3460 aa13.56□□□□□ -0.24
HDDC2-204ENST00000608295 OR5H15A6NDH6 313 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 GLOD5A6NK44 160 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 GABRR3A8MPY1 467 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 STX16-NPEPL1H3BU86 382 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 STX16O14662 325 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 EEDO75530 441 aaKnown RBP13.55□□□□□ -0.24
HDDC2-204ENST00000608295 CLDN9O95484 217 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 RPS17P08708 135 aaKnown RBP13.55□□□□□ -0.24
HDDC2-204ENST00000608295 COL6A2P12110 1019 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 TNFSF10P50591 281 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 HNRNPH2P55795 449 aaKnown RBP13.55□□□□□ -0.24
HDDC2-204ENST00000608295 TAS2R50P59544 299 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 VSNL1P62760 191 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 AP2B1P63010 937 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 SRSF1Q07955 248 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDDC2-204ENST00000608295 SLAMF1Q13291 335 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 E2F2Q14209 437 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 TCHHL1Q5QJ38 904 aaPredicted RBP13.55□□□□□ -0.24
HDDC2-204ENST00000608295 LIPJQ5W064 366 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 C18orf63Q68DL7 685 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 FAM180AQ6UWF9 173 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 C16orf47Q6ZP98 133 aaPredicted RBP13.55□□□□□ -0.24
HDDC2-204ENST00000608295 CHSY3Q70JA7 882 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 SLC5A8Q8N695 610 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 GALNT11Q8NCW6 608 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 OR2W6PQ8NHA6 318 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 M1APQ8TC57 530 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 TRPC4APQ8TEL6 797 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 ZBTB9Q96C00 473 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 MTBPQ96DY7 904 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 SEC16BQ96JE7 1060 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 SIGLEC12Q96PQ1 595 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 TMEM237Q96Q45 408 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 CENPKQ9BS16 269 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 TBCDQ9BTW9 1192 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
HDDC2-204ENST00000608295 C12orf65Q9H3J6 166 aaKnown RBP13.55□□□□□ -0.24
HDDC2-204ENST00000608295 MMP25Q9NPA2 562 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 FARSBQ9NSD9 589 aaKnown RBP13.55□□□□□ -0.24
HDDC2-204ENST00000608295 ABI3Q9P2A4 366 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 MMACHCQ9Y4U1 282 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 PCDHGA11Q9Y5H2 935 aa13.55□□□□□ -0.24
HDDC2-204ENST00000608295 TRAV17A0A0B4J275 112 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 CYR61O00622 381 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 CLDN4O14493 209 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 SUPT7LO94864 414 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 OR4F21O95013 312 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 KRT15P19012 456 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 TSFMP43897 325 aaKnown RBP13.54□□□□□ -0.24
HDDC2-204ENST00000608295 STX4Q12846 297 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 MEP1AQ16819 746 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 TMEM35AQ53FP2 167 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 DEPDC1Q5TB30 811 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 ZNF468Q5VIY5 522 aaPredicted RBP13.54□□□□□ -0.24
HDDC2-204ENST00000608295 OR4C11Q6IEV9 310 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 LETMD1Q6P1Q0 360 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 MILR1Q7Z6M3 343 aa13.54□□□□□ -0.24
HDDC2-204ENST00000608295 ZNF321PQ8N8H1 164 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms