RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	MTHFD2	P13995	350 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ZNF7	P17097	686 aa	Predicted RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	S100P	P25815	95 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	GMFB	P60983	142 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	LSM3	P62310	102 aa	Known RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	LTB4R	Q15722	352 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	SERPINA9	Q86WD7	417 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	OR56A4	Q8NGH8	313 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	DNAJB14	Q8TBM8	379 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	TADA1	Q96BN2	335 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	SERINC2	Q96SA4	455 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	DERL2	Q9GZP9	239 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	RPF2	Q9H7B2	306 aa	Known RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	GORASP2	Q9H8Y8	452 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	FAM86C1	Q9NVL1	165 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	IKZF3	Q9UKT9	509 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	HCN2	Q9UL51	889 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	SIT1	Q9Y3P8	196 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	PTPRD	P23468	1912 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335		A0A1B0GTL3	188 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	SLC22A2	O15244	555 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	KLHL18	O94889	574 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CFI	P05156	583 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CR2	P20023	1033 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CASP3	P42574	277 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ATP12A	P54707	1039 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	DIO3	P55073	304 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	AP1S2	P56377	157 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	KCNK10	P57789	538 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CTBS	Q01459	385 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ACVR1	Q04771	509 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	INAVA	Q3KP66	663 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	C1orf185	Q5T7R7	199 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	NCEH1	Q6PIU2	408 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	DOK6	Q6PKX4	331 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	PIWIL3	Q7Z3Z3	882 aa	Known RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	KBTBD6	Q86V97	674 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	COMTD1	Q86VU5	262 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	OFCC1	Q8IZS5	231 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	KLHL36	Q8N4N3	616 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ELMO1	Q92556	727 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ELP4	Q96EB1	424 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	L3HYPDH	Q96EM0	354 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ZNF578	Q96N58	590 aa	Predicted RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ENAM	Q9NRM1	1142 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	PLSCR3	Q9NRY6	295 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	NDUFAF4	Q9P032	175 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	HECA	Q9UBI9	543 aa	Predicted RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CYP8B1	Q9UNU6	501 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	EIF3L	Q9Y262	564 aa	Known RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335		H7C0S8	307 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	NTRK1	P04629	796 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	TGM1	P22735	817 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	GALNS	P34059	522 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	RGS4	P49798	205 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	FGL2	Q14314	439 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	SLC14A2	Q15849	920 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	C18orf21	Q32NC0	220 aa	Predicted RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	USP39	Q53GS9	565 aa	Known RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	MTX3	Q5HYI7	312 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	KRT78	Q8N1N4	520 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	RFK	Q969G6	155 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	FUBP1	Q96AE4	644 aa	Known RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	KIAA1143	Q96AT1	154 aa	Predicted RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	SHD	Q96IW2	340 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	WDR77	Q9BQA1	342 aa	Predicted RBP	10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	MND1	Q9BWT6	205 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	BOC	Q9BWV1	1114 aa		10.89	□□□□□ -0.67
SUPT5H-216	ENST00000599335	OTOL1	A6NHN0	477 aa	Predicted RBP	10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	FFAR3	O14843	346 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	GPR42	O15529	346 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	SLC25A14	O95258	325 aa	Predicted RBP	10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	QDPR	P09417	244 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ALDOC	P09972	364 aa	Known RBP	10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CKMT2	P17540	419 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CBL	P22681	906 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	GRIA3	P42263	894 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	RPL26	P61254	145 aa	Known RBP	10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	LMAN2	Q12907	356 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	IL27RA	Q6UWB1	636 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	GPRIN3	Q6ZVF9	776 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	PRSS42	Q7Z5A4	293 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ADGRG2	Q8IZP9	1017 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	NOL11	Q9H8H0	719 aa	Known RBP	10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	RNF11	Q9Y3C5	154 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	SNAPIN	O95295	136 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	IGSF6	O95976	241 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	DNTT	P04053	509 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	HOXC12	P31275	282 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CTH	P32929	405 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CREB5	Q02930	508 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	CACNG1	Q06432	222 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ILF3	Q12906	894 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	KCNAB2	Q13303	367 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	PMS2P3	Q13401	168 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	NR6A1	Q15406	480 aa		10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	10.88	□□□□□ -0.67
SUPT5H-216	ENST00000599335	PRSS58	Q8IYP2	241 aa		10.88	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms