RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 BLACEA4D250 179 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 CLDN4O14493 209 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 B4GALT2O60909 372 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 SASH3O75995 380 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 FGF4P08620 206 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 C8orf89P0DMQ9 161 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 SLAMF1Q13291 335 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 ABRAXAS2Q15018 415 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 IMPG1Q17R60 797 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 QSOX2Q6ZRP7 698 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 TRIM42Q8IWZ5 723 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 ZNF595Q8IYB9 648 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 PLPP5Q8NEB5 264 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 TNFRSF12AQ9NP84 129 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 MMACHCQ9Y4U1 282 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 KCNMB2Q9Y691 235 aa18.88■□□□□ 0.61
CCDC61-205ENST00000596161 A0A0A6YYD5 115 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 SYNDIG1LA6NDD5 238 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 ARGFXA6NJG6 315 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 SOCS6O14544 535 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 PRMT3O60678 531 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 CDC123O75794 336 aaPredicted RBP18.87■□□□□ 0.61
CCDC61-205ENST00000596161 HSPA4LO95757 839 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 CPN2P22792 545 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 SERPINB3P29508 390 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 WDR4P57081 412 aaKnown RBP18.87■□□□□ 0.61
CCDC61-205ENST00000596161 RHAGQ02094 409 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 NUP210LQ5VU65 1888 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 KANK2Q63ZY3 851 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 CLEC6AQ6EIG7 209 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 FAAH2Q6GMR7 532 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 TMEM205Q6UW68 189 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 KIRREL2Q6UWL6 708 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 RNF165Q6ZSG1 346 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 COMMD6Q7Z4G1 85 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 APLFQ8IW19 511 aaPredicted RBP18.87■□□□□ 0.61
CCDC61-205ENST00000596161 KIRREL3Q8IZU9 778 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 CLYBLQ8N0X4 340 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 EFCAB3Q8N7B9 438 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 FAM47BQ8NA70 645 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 MAPKAP1Q9BPZ7 522 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 ARHGAP9Q9BRR9 750 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 ZNF717Q9BY31 904 aaPredicted RBP18.87■□□□□ 0.61
CCDC61-205ENST00000596161 ACPTQ9BZG2 426 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 PRDM9Q9NQV7 894 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 KCMF1Q9P0J7 381 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 FBXW2Q9UKT8 454 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 FIS1Q9Y3D6 152 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 TRAF6Q9Y4K3 522 aa18.87■□□□□ 0.61
CCDC61-205ENST00000596161 CCDC88CQ9P219 2028 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 LOC102723996A0A087X1L8 192 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 A0A1W2PQ72 361 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 FAM227AF5H4B4 570 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 SLC28A1O00337 649 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 EEDO75530 441 aaKnown RBP18.86■□□□□ 0.61
CCDC61-205ENST00000596161 BGNP21810 368 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 TLX1P31314 330 aaPredicted RBP18.86■□□□□ 0.61
CCDC61-205ENST00000596161 BUD31P41223 144 aaPredicted RBP18.86■□□□□ 0.61
CCDC61-205ENST00000596161 HSD17B7P56937 341 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 ABCE1P61221 599 aaKnown RBP18.86■□□□□ 0.61
CCDC61-205ENST00000596161 ACSM2AQ08AH3 577 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 TBL3Q12788 808 aaKnown RBP18.86■□□□□ 0.61
CCDC61-205ENST00000596161 STX3Q13277 289 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 NSDHLQ15738 373 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 SPIN4Q56A73 249 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 SH2D4BQ5SQS7 431 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 FAM219BQ5XKK7 198 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 ACSM2BQ68CK6 577 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 MRM1Q6IN84 353 aaKnown RBP18.86■□□□□ 0.61
CCDC61-205ENST00000596161 SCIMPQ6UWF3 145 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 TRIM46Q7Z4K8 759 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 GPR180Q86V85 440 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 SHISA5Q8N114 240 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 CLEC1AQ8NC01 280 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 OR11G2Q8NGC1 345 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 EXTL1Q92935 676 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 PTCHD1Q96NR3 888 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 PRTFDC1Q9NRG1 225 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 FBXL4Q9UKA2 621 aa18.86■□□□□ 0.61
CCDC61-205ENST00000596161 ERVH48-1M5A8F1 160 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 CYR61O00622 381 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 GUCY1B2O75343 617 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 KLK1P06870 262 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 FAM58BPP0C7Q3 252 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 CHN1P15882 459 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 HMGCS1Q01581 520 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 SPDYAQ5MJ70 313 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 CCNYL2Q5T2Q4 361 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 C1orf52Q8N6N3 182 aaKnown RBP18.85■□□□□ 0.61
CCDC61-205ENST00000596161 C7orf57Q8NEG2 295 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 RAB3IL1Q8TBN0 382 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 CHTF18Q8WVB6 975 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 TTC9Q92623 222 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 ING2Q9H160 280 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 WDR41Q9HAD4 459 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 PFDN4Q9NQP4 134 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 RIC8BQ9NVN3 520 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 ZNF446Q9NWS9 450 aa18.85■□□□□ 0.61
CCDC61-205ENST00000596161 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.85■□□□□ 0.61
CCDC61-205ENST00000596161 CACNA1BQ00975 2339 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms