RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 FARSAQ9Y285 508 aaKnown RBP21.28■■□□□ 1
SNRNP70-204ENST00000595231 SSUH2Q9Y2M2 353 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 PCDHGA6Q9Y5G7 932 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 FAM227AF5H4B4 570 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 TAF4O00268 1085 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 PEX11AO75192 247 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 LIFP15018 202 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 OCA2Q04671 838 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 SRSF6Q13247 344 aaKnown RBP21.28■■□□□ 1
SNRNP70-204ENST00000595231 CCNYL2Q5T2Q4 361 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 VWA5B1Q5TIE3 1220 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 VASH2Q86V25 355 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 IL17BQ9UHF5 180 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 MCM8Q9UJA3 840 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 ATG4BQ9Y4P1 393 aa21.28■■□□□ 1
SNRNP70-204ENST00000595231 CYR61O00622 381 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 FAM58BPP0C7Q3 252 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 RNH1P13489 461 aaKnown RBP21.27■■□□□ 1
SNRNP70-204ENST00000595231 PTPN4P29074 926 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 EFNA3P52797 238 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 HNRNPH2P55795 449 aaKnown RBP21.27■■□□□ 1
SNRNP70-204ENST00000595231 RAB38P57729 211 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 FOXK2Q01167 660 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 GALNTL6Q49A17 601 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 C6orf136Q5SQH8 315 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 CYP20A1Q6UW02 462 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 SHISA6Q6ZSJ9 500 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 MED25Q71SY5 747 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 GPR180Q86V85 440 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 TBC1D20Q96BZ9 403 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 TUBGCP3Q96CW5 907 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 FCRL1Q96LA6 429 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 OR1F2PQ96R84 312 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 AKTIPQ9H8T0 292 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 GPN2Q9H9Y4 310 aaPredicted RBP21.27■■□□□ 1
SNRNP70-204ENST00000595231 LANCL2Q9NS86 450 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 RIC8BQ9NVN3 520 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 KCND3Q9UK17 655 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 FBXW2Q9UKT8 454 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 TCFL5Q9UL49 500 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 USH1CQ9Y6N9 552 aa21.27■■□□□ 1
SNRNP70-204ENST00000595231 URB1O60287 2271 aaKnown RBP21.27■□□□□ 0.99
SNRNP70-204ENST00000595231 SDHDO14521 159 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 KLK10O43240 276 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 PROM1O43490 865 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 CD63P08962 238 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 PRR35P0CG20 571 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 IL10P22301 178 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 TIA1P31483 386 aaKnown RBP eCLIP21.26■□□□□ 0.993e-8■■□□□ 11.5
SNRNP70-204ENST00000595231 RPS18P62269 152 aaKnown RBP21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 RPS15P62841 145 aaKnown RBP21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 KLC1Q07866 573 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 NOXRED1Q6NXP6 359 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 PROSER1Q86XN7 944 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 MIEF2Q96C03 454 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 PPP3R2Q96LZ3 170 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 ZNF317Q96PQ6 595 aaPredicted RBP21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 CSF3RQ99062 836 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 RBCK1Q9BYM8 510 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 SOX17Q9H6I2 414 aaPredicted RBP21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 RAXQ9Y2V3 346 aa21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 POLR3HQ9Y535 204 aaPredicted RBP21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 MRPS18BQ9Y676 258 aaKnown RBP21.26■□□□□ 0.99
SNRNP70-204ENST00000595231 OR2W5A6NFC9 320 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 TRPC5OSA6NMA1 111 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 PCDH7O60245 1069 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 FHP07954 510 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 ALOX15P16050 662 aaPredicted RBP21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 MAPK12P53778 367 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 ATP6AP1LQ52LC2 224 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 LARP4Q71RC2 724 aaKnown RBP eCLIP21.25■□□□□ 0.992e-7■■□□□ 12
SNRNP70-204ENST00000595231 PRSS58Q8IYP2 241 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 TMEM52Q8NDY8 209 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 OR2Y1Q8NGV0 311 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 KIAA1143Q96AT1 154 aaPredicted RBP21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 TM4SF18Q96CE8 201 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 MAELQ96JY0 434 aaKnown RBP21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 EBPLQ9BY08 206 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 ACTL8Q9H568 366 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 WDR55Q9H6Y2 383 aaPredicted RBP21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 C14orf105Q9NVL8 296 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 LYARQ9NX58 379 aaKnown RBP21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 TEX10Q9NXF1 929 aaPredicted RBP21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 NXT1Q9UKK6 140 aaKnown RBP21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 DLGAP4Q9Y2H0 992 aa21.25■□□□□ 0.99
SNRNP70-204ENST00000595231 A0A1W2PR48 441 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 ARHGAP10A1A4S6 786 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 EFSO43281 561 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 WT1P19544 449 aaPredicted RBP21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 EPHA3P29320 983 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 HNRNPFP52597 415 aaKnown RBP21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 RPL38P63173 70 aaKnown RBP21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 SLC9B1Q4ZJI4 515 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 FAM47BQ8NA70 645 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 WDR70Q9NW82 654 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 MS4A12Q9NXJ0 267 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 TMED5Q9Y3A6 229 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 PTRH2Q9Y3E5 179 aaKnown RBP21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 NUP210LQ5VU65 1888 aa21.24■□□□□ 0.99
SNRNP70-204ENST00000595231 POLR3GO15318 223 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms