RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 KLHDC8BQ8IXV7 354 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 KDM8Q8N371 416 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 DNAJC22Q8N4W6 341 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 TRIML2Q8N7C3 387 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 IQUBQ8NA54 791 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 XXYLT1Q8NBI6 393 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 PPFIBP2Q8ND30 876 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 OR2T12Q8NG77 320 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 SPATA3Q8NHX4 192 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 GANCQ8TET4 914 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 LPGAT1Q92604 370 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 ZNF524Q96C55 264 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 PIWIL1Q96J94 861 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 TCEANC2Q96MN5 208 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 DDX50Q9BQ39 737 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 BCL7BQ9BQE9 202 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 MGME1Q9BQP7 344 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 C16orf70Q9BSU1 422 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 THUMPD2Q9BTF0 503 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 PUS3Q9BZE2 481 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 CARD9Q9H257 536 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 LRRC40Q9H9A6 602 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 RPRD1BQ9NQG5 326 aaKnown RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 CENPMQ9NSP4 180 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 SOHLH2Q9NX45 425 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 CNIH4Q9P003 139 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 MDFICQ9P1T7 246 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 RHCGQ9UBD6 479 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 ARMCX3Q9UH62 379 aaPredicted RBP4.49□□□□□ -1.69
SMAD4-216ENST00000593223 GMEB1Q9Y692 573 aa4.49□□□□□ -1.69
SMAD4-216ENST00000593223 ZDBF2Q9HCK1 2354 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 CHD6Q8TD26 2715 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 SPTBN4Q9H254 2564 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 ANKRD11Q6UB99 2663 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 A0A1B0GWJ7 208 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 A0A1W2PRB8 838 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 OOEPA6NGQ2 149 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 NCF1BA6NI72 391 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 NCF1CA8MVU1 366 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 BLOC1S5-TXNDC5H3BN57 136 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 TSPAN1O60635 241 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 CREG1O75629 220 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 FLOT1O75955 427 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 SERPINB2P05120 415 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 VIMP08670 466 aaKnown RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 NCF1P14598 390 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 ZNF3P17036 446 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 ALDH4A1P30038 563 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 CDK3Q00526 305 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 CCDC57Q2TAC2 916 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 ZC2HC1CQ53FD0 456 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 XKR3Q5GH77 459 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 NEK5Q6P3R8 708 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 PSRC1Q6PGN9 363 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 CORO6Q6QEF8 472 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 FIGLAQ6QHK4 219 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 ISLR2Q6UXK2 745 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 RBPMS2Q6ZRY4 209 aaKnown RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 SPATA19Q7Z5L4 167 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 TMEM173Q86WV6 379 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 PLD3Q8IV08 490 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 CCDC83Q8IWF9 413 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 ZCCHC7Q8N3Z6 543 aaKnown RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 GUF1Q8N442 669 aaKnown RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 MINDY1Q8N5J2 469 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 GBP7Q8N8V2 638 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 OR2AJ1Q8NGZ0 328 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 ACMSDQ8TDX5 336 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 PTPMT1Q8WUK0 201 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 FCAMRQ8WWV6 532 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 METTL21AQ8WXB1 218 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 TMEM143Q96AN5 459 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 PTERQ96BW5 349 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 NSL1Q96IY1 281 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 TPD52L3Q96J77 140 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 NAP1L3Q99457 506 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 RIOK1Q9BRS2 568 aaKnown RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 POLR1EQ9GZS1 481 aaKnown RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 HAUS4Q9H6D7 363 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 PELI2Q9HAT8 420 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 PRMT8Q9NR22 394 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 TMOD3Q9NYL9 352 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMAD4-216ENST00000593223 ATP6V1HQ9UI12 483 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 MAD2L2Q9UI95 211 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 NAALAD2Q9Y3Q0 740 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 NCOR1O75376 2440 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 MON2Q7Z3U7 1717 aa4.48□□□□□ -1.69
SMAD4-216ENST00000593223 ASTN2O75129 1339 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-216ENST00000593223 USP42Q9H9J4 1324 aaKnown RBP4.47□□□□□ -1.69
SMAD4-216ENST00000593223 CACNA1SQ13698 1873 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 NFAT5O94916 1531 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 SLX4Q8IY92 1834 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 USP34Q70CQ2 3546 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 LOC102723996A0A087X1L8 192 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 HTR3EA5X5Y0 456 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 H0Y8G0 127 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 E2F3O00716 465 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 IDH1O75874 414 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms