RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 CLDN16Q9Y5I7 305 aa19.41■□□□□ 0.7
MBD3-205ENST00000589064 MYOCOSA0A1B0GUC4 107 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 SNRPAP09012 282 aaKnown RBP19.4■□□□□ 0.7
MBD3-205ENST00000589064 FAM153BP0C7A2 387 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 ATP5A1P25705 553 aaKnown RBP19.4■□□□□ 0.7
MBD3-205ENST00000589064 CNTFP26441 200 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 PPP2R1BP30154 601 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 SERPINB1P30740 379 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 SRSF11Q05519 484 aaKnown RBP19.4■□□□□ 0.7
MBD3-205ENST00000589064 AP5B1Q2VPB7 878 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 FAM153CQ494X1 144 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 DEPDC1Q5TB30 811 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 KHDRBS2Q5VWX1 349 aaKnown RBP19.4■□□□□ 0.7
MBD3-205ENST00000589064 LIPJQ5W064 366 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 HUS1BQ8NHY5 278 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 ADAMTS18Q8TE60 1221 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 MTERF1Q99551 399 aaKnown RBP19.4■□□□□ 0.7
MBD3-205ENST00000589064 MAPKAP1Q9BPZ7 522 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 OLAHQ9NV23 265 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 RNF11Q9Y3C5 154 aa19.4■□□□□ 0.7
MBD3-205ENST00000589064 EXOC1LA0A1B0GW35 172 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 GABRR3A8MPY1 467 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 E2F3O00716 465 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 CTNSO60931 367 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 MYO1DO94832 1006 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 RASAL1O95294 804 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 COL6A2P12110 1019 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 EEF1DP29692 281 aaKnown RBP19.39■□□□□ 0.69
MBD3-205ENST00000589064 RCN2Q14257 317 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 TSNAXIP1Q2TAA8 658 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 ZNF766Q5HY98 468 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 SPINK14Q6IE38 97 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 TRMT10CQ7L0Y3 403 aaKnown RBP19.39■□□□□ 0.69
MBD3-205ENST00000589064 LRRN4CLQ8ND94 238 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 SIGLEC12Q96PQ1 595 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 SORBS1Q9BX66 1292 aaKnown RBP19.39■□□□□ 0.69
MBD3-205ENST00000589064 LYRM4Q9HD34 91 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 ADGRE2Q9UHX3 823 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 PCDHGA11Q9Y5H2 935 aa19.39■□□□□ 0.69
MBD3-205ENST00000589064 LRRK2Q5S007 2527 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 COL12A1Q99715 3063 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 ABHD2P08910 425 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 RNF224P0DH78 156 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 EDN3P14138 238 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 HIST1H1TP22492 207 aaPredicted RBP19.38■□□□□ 0.69
MBD3-205ENST00000589064 GCAP28676 217 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 PIK3CBP42338 1070 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 OC90Q02509 493 aaPredicted RBP19.38■□□□□ 0.69
MBD3-205ENST00000589064 OR1C1Q15619 314 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 INAQ16352 499 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 CPSF6Q16630 551 aaKnown RBP eCLIP19.38■□□□□ 0.69
MBD3-205ENST00000589064 LGSNQ5TDP6 509 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 ZNF324BQ6AW86 544 aaPredicted RBP19.38■□□□□ 0.69
MBD3-205ENST00000589064 OR4C11Q6IEV9 310 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 SSC4DQ8WTU2 575 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 ATP6V1E2Q96A05 226 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 SLX1AQ9BQ83 275 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 DEFB126Q9BYW3 111 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 NOL11Q9H8H0 719 aaKnown RBP19.38■□□□□ 0.69
MBD3-205ENST00000589064 KLHL1Q9NR64 748 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 XPR1Q9UBH6 696 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 FBXW2Q9UKT8 454 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 ESPL1Q14674 2120 aa19.38■□□□□ 0.69
MBD3-205ENST00000589064 RIPK2O43353 540 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 IFNA16P05015 189 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 SSR2P43308 183 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 PIK3CGP48736 1102 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 NEK2P51955 445 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 MLF1P58340 268 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 RPS13P62277 151 aaKnown RBP19.37■□□□□ 0.69
MBD3-205ENST00000589064 ZNF468Q5VIY5 522 aaPredicted RBP19.37■□□□□ 0.69
MBD3-205ENST00000589064 METTL2BQ6P1Q9 378 aaKnown RBP19.37■□□□□ 0.69
MBD3-205ENST00000589064 LGI4Q8N135 537 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 L3MBTL4Q8NA19 623 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 APCDD1LQ8NCL9 501 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 MDS2Q8NDY4 140 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 B3GNT7Q8NFL0 401 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 RGMAQ96B86 450 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 CDK15Q96Q40 435 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 MRPL57Q9BQC6 102 aaKnown RBP19.37■□□□□ 0.69
MBD3-205ENST00000589064 HES7Q9BYE0 225 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 ALOXE3Q9BYJ1 711 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 DMRT3Q9NQL9 472 aa19.37■□□□□ 0.69
MBD3-205ENST00000589064 ERRFI1Q9UJM3 462 aaPredicted RBP19.37■□□□□ 0.69
MBD3-205ENST00000589064 USP9XQ93008 2570 aaPredicted RBP19.36■□□□□ 0.69
MBD3-205ENST00000589064 TRBV11-1A0A0K0K1C0 115 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 CYSRT1A8MQ03 144 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 H0YIV9 168 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 OR7A17O14581 309 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 UGDHO60701 494 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 SMIM24O75264 130 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 PTX3P26022 381 aaPredicted RBP19.36■□□□□ 0.69
MBD3-205ENST00000589064 TPP2P29144 1249 aaPredicted RBP19.36■□□□□ 0.69
MBD3-205ENST00000589064 ARL1P40616 181 aaPredicted RBP19.36■□□□□ 0.69
MBD3-205ENST00000589064 CLCN2P51788 898 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 RAP1GDS1P52306 607 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 STX4Q12846 297 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 SLAMF1Q13291 335 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 SLC29A2Q14542 456 aa19.36■□□□□ 0.69
MBD3-205ENST00000589064 ZRSR2Q15696 482 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms