RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 C6orf15Q6UXA7 325 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 RINLQ6ZS11 566 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 VN1R4Q7Z5H5 301 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 SCUBE1Q8IWY4 988 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 NLGN4XQ8N0W4 816 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 OR4N4Q8N0Y3 316 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 ZNF740Q8NDX6 193 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 NLGN4YQ8NFZ3 816 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 SLC13A3Q8WWT9 602 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 MVB12AQ96EY5 273 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 ZBTB18Q99592 522 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 C17orf62Q9BQA9 187 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 CADM1Q9BY67 442 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 ELOVL6Q9H5J4 265 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 AKTIPQ9H8T0 292 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 PRM3Q9NNZ6 103 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 CUTCQ9NTM9 273 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 ADGRE2Q9UHX3 823 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 G3BP2Q9UN86 482 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 EIF3LQ9Y262 564 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 PCDHGA11Q9Y5H2 935 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 TEX15Q9BXT5 2789 aa12.81□□□□□ -0.36
CSNK1D-220ENST00000581737 A0A1B0GX78 115 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 URADA6NGE7 173 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 OR7A17O14581 309 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 DSCR3O14972 297 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 ANGPT2O15123 496 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 NDUFS4O43181 175 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 RAD1O60671 282 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 CLEC3AO75596 197 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 NTRK1P04629 796 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 JUNP05412 331 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 LINC00032P0C843 101 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 ZNF28P17035 718 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 AGXTP21549 392 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 KCNK10P57789 538 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 PDCD4Q53EL6 469 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 AGKQ53H12 422 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 NIPAL1Q6NVV3 410 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 PRMT9Q6P2P2 845 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 BNC2Q6ZN30 1099 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 NET1Q7Z628 596 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 ZFAND4Q86XD8 727 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 POU5F2Q8N7G0 328 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 L3MBTL4Q8NA19 623 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 GALNT6Q8NCL4 622 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 NT5CQ8TCD5 201 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 JADE3Q92613 823 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 ROPN1LQ96C74 230 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 TM4SF19Q96DZ7 209 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 SPRY4Q9C004 299 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 SPNS1Q9H2V7 528 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 RHBGQ9H310 441 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 NOP53Q9NZM5 478 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 ZIM2Q9NZV7 527 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 BAIAP2L1Q9UHR4 511 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 PADI1Q9ULC6 663 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 CDC14AQ9UNH5 594 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 RUVBL1Q9Y265 456 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 NDUFAF1Q9Y375 327 aa12.8□□□□□ -0.36
CSNK1D-220ENST00000581737 LOC100653049A0A140TA62 436 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 C9J4A7 227 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 H0YIV9 168 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 P2RX6O15547 441 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 LCMT2O60294 686 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 PRAMEF4O60810 478 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 KRT34O76011 436 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 ATP6V1G2O95670 118 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 SERPIND1P05546 499 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 CTSBP07858 339 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 PIM1P11309 404 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 HSD3B1P14060 373 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 CD22P20273 847 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 HSD3B2P26439 372 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 RORAP35398 523 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 GCGRP47871 477 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 STXBP1P61764 594 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 ABHD18Q0P651 414 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 FAM53BQ14153 422 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 TBR1Q16650 682 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 HKDC1Q2TB90 917 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 PRAMEF9Q5VWM5 478 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 LETMD1Q6P1Q0 360 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 HACD2Q6Y1H2 254 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 VASH2Q86V25 355 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 DTX1Q86Y01 620 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 LAS2Q8IYD9 372 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 PGAM4Q8N0Y7 254 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 IL22RA1Q8N6P7 574 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 ANKRD53Q8N9V6 530 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 FNDC5Q8NAU1 212 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 OR52B6Q8NGF0 335 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 KIAA1143Q96AT1 154 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 KCNA7Q96RP8 456 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 THTPAQ9BU02 230 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 EFHD1Q9BUP0 239 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 GID8Q9NWU2 228 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 NMRK1Q9NWW6 199 aa12.79□□□□□ -0.36
CSNK1D-220ENST00000581737 NDOR1Q9UHB4 597 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms