RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329		A0A1W2PPR1	153 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TCRBV9S1A1T	A0A576	114 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM221A	A4D161	298 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NCF1B	A6NI72	391 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF839	A8K0R7	811 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NCF1C	A8MVU1	366 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329		E9PLN8	166 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ERI3	O43414	337 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RAD51C	O43502	376 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PEX1	O43933	1283 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TMPRSS11D	O60235	418 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FGF17	O60258	216 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LDB3	O75112	727 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SH3BGRL	O75368	114 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EED	O75530	441 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ITGA10	O75578	1167 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CLEC3A	O75596	197 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PDE9A	O76083	593 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MYO1D	O94832	1006 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CLDN14	O95500	239 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TTC4	O95801	387 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	IGHG3	P01860	377 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ENO2	P09104	434 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC35G6	P0C7Q6	338 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RNH1	P13489	461 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NCF1	P14598	390 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	S1PR1	P21453	382 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	IL10	P22301	178 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CCND1	P24385	295 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ATP5A1	P25705	553 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EEF1D	P29692	281 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PTGER4	P35408	488 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CASP2	P42575	452 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HSPA7	P48741	367 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PLA2G16	P53816	162 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HNRNPH2	P55795	449 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PER3	P56645	1201 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	WNT3	P56703	355 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RAB38	P57729	211 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NUP107	P57740	925 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SARNP	P82979	210 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	IRF9	Q00978	393 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ALDH6A1	Q02252	535 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DUSP2	Q05923	314 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PDIA2	Q13087	525 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SNTB1	Q13884	538 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CSHL1	Q14406	222 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NAA30	Q147X3	362 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TERF2	Q15554	542 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MAPKAPK3	Q16644	382 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PRSS53	Q2L4Q9	553 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HYAL4	Q2M3T9	481 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF791	Q3KP31	576 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KRTCAP3	Q53RY4	240 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MFSD4B	Q5TF39	518 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	IRAK1BP1	Q5VVH5	260 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C18orf63	Q68DL7	685 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MRM1	Q6IN84	353 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM45BP	Q6NSW5	357 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	XKRX	Q6PP77	449 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RPTN	Q6XPR3	784 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CMC1	Q7Z7K0	106 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CD163	Q86VB7	1156 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GPSM1	Q86YR5	675 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KRTAP1-3	Q8IUG1	177 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR4N5	Q8IXE1	308 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LAS2	Q8IYD9	372 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CYP4X1	Q8N118	509 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MMP21	Q8N119	569 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TXLNB	Q8N3L3	684 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TMEM251	Q8N6I4	163 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF441	Q8N8Z8	693 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PDPR	Q8NCN5	879 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NAXE	Q8NCW5	288 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR2L5	Q8NG80	312 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR2M7	Q8NG81	312 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM45A	Q8TCE6	357 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	METTL21A	Q8WXB1	218 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GAL3ST3	Q96A11	431 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C14orf79	Q96F83	325 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SEC16B	Q96JE7	1060 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RASL10B	Q96S79	203 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GPR22	Q99680	433 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SPOCK3	Q9BQ16	436 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	VKORC1	Q9BQB6	163 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TRIM31	Q9BZY9	425 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DERL2	Q9GZP9	239 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DEFB127	Q9H1M4	99 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RHOJ	Q9H4E5	214 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PNPLA3	Q9NST1	481 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TUBA8	Q9NY65	449 aa	Predicted RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MYOT	Q9UBF9	498 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	VTI1B	Q9UEU0	232 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ASIC3	Q9UHC3	531 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DAPP1	Q9UN19	280 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RNF6	Q9Y252	685 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MMACHC	Q9Y4U1	282 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ASB4	Q9Y574	426 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PCNX3	Q9H6A9	2034 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MPDZ	O75970	2070 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms