RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ZNF460Q14592 562 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 ADPRMQ3LIE5 342 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 HSDL2Q6YN16 418 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 SULF2Q8IWU5 870 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 ZFP62Q8NB50 900 aaPredicted RBP17.35■□□□□ 0.37
LINC01238-205ENST00000567549 MYRIPQ8NFW9 859 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 OR5L2Q8NGL0 311 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 C16orf52Q8NHV5 167 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 FAM57AQ8TBR7 257 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 NCLNQ969V3 563 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 PWWP2AQ96N64 755 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 TBCDQ9BTW9 1192 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 PHACTR1Q9C0D0 580 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 TP63Q9H3D4 680 aaPredicted RBP17.35■□□□□ 0.37
LINC01238-205ENST00000567549 SLC24A3Q9HC58 644 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 LYRM4Q9HD34 91 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 WHRNQ9P202 907 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 COPS7AQ9UBW8 275 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 ADGRE2Q9UHX3 823 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 RNF112Q9ULX5 631 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 PKDREJQ9NTG1 2253 aa17.35■□□□□ 0.37
LINC01238-205ENST00000567549 CTNSO60931 367 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 DNAJB6O75190 326 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 TPOP07202 933 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 HNRNPH1P31943 449 aaKnown RBP17.34■□□□□ 0.37
LINC01238-205ENST00000567549 SPRP35270 261 aaPredicted RBP17.34■□□□□ 0.37
LINC01238-205ENST00000567549 GDF5P43026 501 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 PGGT1BP53609 377 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 IRF8Q02556 426 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 CAV1Q03135 178 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 TBL3Q12788 808 aaKnown RBP17.34■□□□□ 0.37
LINC01238-205ENST00000567549 TBCCQ15814 346 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 TMEM35AQ53FP2 167 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 ZNF468Q5VIY5 522 aaPredicted RBP17.34■□□□□ 0.37
LINC01238-205ENST00000567549 GK5Q6ZS86 529 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 CHSY3Q70JA7 882 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 LRRC70Q7Z2Q7 622 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 CCDC91Q7Z6B0 441 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 DOLPP1Q86YN1 238 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 CEP97Q8IW35 865 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 FAM47BQ8NA70 645 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 OR8K3Q8NH51 312 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 STAG3L4Q8TBR4 150 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 ANKRD49Q8WVL7 239 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 WDR34Q96EX3 536 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 SPOCK3Q9BQ16 436 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 WDR83Q9BRX9 315 aaKnown RBP17.34■□□□□ 0.37
LINC01238-205ENST00000567549 IKZF3Q9UKT9 509 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 DAPP1Q9UN19 280 aa17.34■□□□□ 0.37
LINC01238-205ENST00000567549 CACNA1CQ13936 2221 aa17.33■□□□□ 0.37
LINC01238-205ENST00000567549 FOXO6A8MYZ6 492 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 SLU7O95391 586 aaKnown RBP17.33■□□□□ 0.36
LINC01238-205ENST00000567549 TNNI3P19429 210 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 PPP2R1BP30154 601 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 RPL21P46778 160 aaKnown RBP17.33■□□□□ 0.36
LINC01238-205ENST00000567549 RAB10P61026 200 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 PHEXP78562 749 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 PLGLB1Q02325 96 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 RUNX2Q13950 521 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 ABHD17CQ6PCB6 329 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 SLC22A16Q86VW1 577 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 SHISA5Q8N114 240 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 PDPRQ8NCN5 879 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 PSD4Q8NDX1 1056 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 C14orf79Q96F83 325 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 ART5Q96L15 291 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 GPR22Q99680 433 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 RBBP8Q99708 897 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.33■□□□□ 0.36
LINC01238-205ENST00000567549 MS4A12Q9NXJ0 267 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 MYOTQ9UBF9 498 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 SNX24Q9Y343 169 aa17.33■□□□□ 0.36
LINC01238-205ENST00000567549 UTP11Q9Y3A2 253 aaKnown RBP17.33■□□□□ 0.36
LINC01238-205ENST00000567549 LRBAP50851 2863 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 CCDC189A1A4V9 331 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 CDC40O60508 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC01238-205ENST00000567549 CCNT2O60583 730 aaKnown RBP17.32■□□□□ 0.36
LINC01238-205ENST00000567549 SNRPB2P08579 225 aaKnown RBP17.32■□□□□ 0.36
LINC01238-205ENST00000567549 HSPA7P48741 367 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 LIM2P55344 173 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 NAB1Q13506 487 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 FASTKD3Q14CZ7 662 aaKnown RBP17.32■□□□□ 0.36
LINC01238-205ENST00000567549 WHAMMP3Q1A5X7 153 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 AP5B1Q2VPB7 878 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 GRTP1Q5TC63 336 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 NDUFAF5Q5TEU4 345 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 OPN5Q6U736 354 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 CAPN12Q6ZSI9 719 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 ACAD11Q709F0 780 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 RAPH1Q70E73 1250 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 TBC1D1Q86TI0 1168 aaPredicted RBP17.32■□□□□ 0.36
LINC01238-205ENST00000567549 AMER2Q8N7J2 671 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 SDCCAG3Q96C92 435 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 SGCZQ96LD1 299 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 LURAP1Q96LR2 239 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 QRFPRQ96P65 431 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 DMRTA2Q96SC8 542 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 ERP44Q9BS26 406 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 MCMBPQ9BTE3 642 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 NMRAL1Q9HBL8 299 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms