RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 P04436 131 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 ZSCAN5DPP0CG00 497 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 ADRA1DP25100 572 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 PSMA3P25788 255 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 IVDP26440 423 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 FOXN2P32314 431 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 AGFG1P52594 562 aaKnown RBP8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 PNLIPRP1P54315 467 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 ATP5J2P56134 94 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 SNRPNP63162 240 aaKnown RBP8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 FOXO1Q12778 655 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 SPARCL1Q14515 664 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 KCNJ11Q14654 390 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 POU6F1Q14863 301 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 HERC3Q15034 1050 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 HECTD2Q5U5R9 776 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 PTRHD1Q6GMV3 140 aaKnown RBP8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 NIPAL1Q6NVV3 410 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 BHLHB9Q6PI77 547 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 RTL4Q6ZR62 310 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 MICALCLQ6ZW33 695 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 ABHD13Q7L211 337 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 OTOAQ7RTW8 1153 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 PM20D2Q8IYS1 436 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 KRT222Q8N1A0 295 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 APCDD1LQ8NCL9 501 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 MAPK1IP1LQ8NDC0 245 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 SLC13A3Q8WWT9 602 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 SNF8Q96H20 258 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 PRAP1Q96NZ9 151 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 PANX3Q96QZ0 392 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 MACROD1Q9BQ69 325 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 NAT9Q9BTE0 207 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 BEX2Q9BXY8 128 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 REG4Q9BYZ8 158 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 IL22Q9GZX6 179 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 CXorf56Q9H5V9 222 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 ACKR4Q9NPB9 350 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 SACM1LQ9NTJ5 587 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 ZNF226Q9NYT6 803 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 C6orf203Q9P0P8 240 aaPredicted RBP8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 WHRNQ9P202 907 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 ANAPC5Q9UJX4 755 aa8.35□□□□□ -1.07
VPS9D1-205ENST00000565452 A0A0G2JMM0 328 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 A0A1W2PPB8 328 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 A0A1W2PRS3 328 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 TCRBV16S1A1N1A0A5B0 115 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 KRT87PA6NCN2 255 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 MROH6A6NGR9 719 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 SDR42E2A6NKP2 422 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 KIR3DP1A8MWS1 328 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 CTIFO43310 598 aaKnown RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 CHST10O43529 356 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 SOX30O94993 753 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 OR6B1O95007 311 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 ERGP11308 486 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 MC3RP41968 323 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 CPA2P48052 419 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 BTG2P78543 158 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 HYAL2Q12891 473 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 CALCOCO2Q13137 446 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 CAPRIN1Q14444 709 aaKnown RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 TERF2Q15554 542 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 TRIP13Q15645 432 aaPredicted RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 CLEC12BQ2HXU8 276 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 ACSF3Q4G176 576 aaPredicted RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 FASTKD1Q53R41 847 aaKnown RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 XKR6Q5GH73 641 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 PCID2Q5JVF3 399 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 THEMIS2Q5TEJ8 643 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 NSUN5P2Q63ZY6 315 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 QSOX2Q6ZRP7 698 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 VN1R4Q7Z5H5 301 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 CAND1Q86VP6 1230 aaKnown RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 PDSS2Q86YH6 399 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 NAT8LQ8N9F0 302 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 GOLM1Q8NBJ4 401 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 KCT2Q8NC54 265 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 PPHLN1Q8NEY8 458 aaKnown RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 OR5T3Q8NGG3 340 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 OR52K1Q8NGK4 314 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 OR6P1Q8NGX9 317 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 OR4L1Q8NH43 312 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 NEIL3Q8TAT5 605 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 ZCCHC10Q8TBK6 192 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 TMEM171Q8WVE6 324 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 NTNG2Q96CW9 530 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 LRRC39Q96DD0 335 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 TM4SF19Q96DZ7 209 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 ZBED6CLQ96FA7 236 aaPredicted RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 PIK3IP1Q96FE7 263 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 VMP1Q96GC9 406 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 PLA2G12AQ9BZM1 189 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 TSPYL1Q9H0U9 437 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 L2HGDHQ9H9P8 463 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 CLK4Q9HAZ1 481 aaKnown RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 PRDM9Q9NQV7 894 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 FAM114A2Q9NRY5 505 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 ABCF3Q9NUQ8 709 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms