RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 TGM3Q08188 693 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 GALNT1Q10472 559 aaPredicted RBP8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 TBL3Q12788 808 aaKnown RBP8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 IFT88Q13099 833 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 KCNAB2Q13303 367 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 LY6DQ14210 128 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 MINDY4Q4G0A6 757 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 TCHHL1Q5QJ38 904 aaPredicted RBP8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 OR4C11Q6IEV9 310 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 TCTN3Q6NUS6 607 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 ATG14Q6ZNE5 492 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 RNF165Q6ZSG1 346 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 LANCL3Q6ZV70 420 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 METTL4Q8N3J2 472 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 CCNYL1Q8N7R7 359 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 CDYL2Q8N8U2 506 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 CCDC63Q8NA47 563 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 SLC39A7Q92504 469 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 RGMAQ96B86 450 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 C8orf44Q96CB5 159 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 TLCD1Q96CP7 247 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 C11orf24Q96F05 449 aaPredicted RBP8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 FAR2Q96K12 515 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 CSF3RQ99062 836 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 SERPINI1Q99574 410 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 TRMOQ9BU70 441 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 SORBS1Q9BX66 1292 aaKnown RBP8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 IQCGQ9H095 443 aaKnown RBP8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 ZNF700Q9H0M5 742 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 ELOVL6Q9H5J4 265 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 TMBIM4Q9HC24 238 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 MID1IP1Q9NPA3 183 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 ADAM29Q9UKF5 820 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 SNX6Q9UNH7 406 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 MMACHCQ9Y4U1 282 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 SCN2AQ99250 2005 aa8.29□□□□□ -1.08
NSMCE1-206ENST00000563900 NBASA2RRP1 2371 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 NPIPB8E9PQR5 432 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 MKRN2OSH3BPM6 223 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 K7EM74 188 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 SAP18O00422 153 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 TM9SF1O15321 606 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 NPHS1O60500 1241 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 SH3BGRLO75368 114 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 EEDO75530 441 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 CDC123O75794 336 aaPredicted RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 KRT6AP02538 564 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 PDGFAP04085 211 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 KRT6BP04259 564 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 SFTPCP11686 197 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 CHN1P15882 459 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 ARL1P40616 181 aaPredicted RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 SERPINB4P48594 390 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 KRT6CP48668 564 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 HNRNPH2P55795 449 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 HSD17B7P56937 341 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 BTG2P78543 158 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 EEF1A2Q05639 463 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 CSTF3Q12996 717 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 AIMP2Q13155 320 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 ABRAXAS2Q15018 415 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 AP5B1Q2VPB7 878 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 CES4AQ5XG92 561 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 NDUFAF7Q7L592 441 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 CPEB2Q7Z5Q1 589 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 ANKRD37Q7Z713 158 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 NUDT13Q86X67 352 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 ZNF595Q8IYB9 648 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 GBP7Q8N8V2 638 aaPredicted RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 FAM47BQ8NA70 645 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 FDCSPQ8NFU4 85 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 METTL6Q8TCB7 284 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 SELENOMQ8WWX9 145 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 ABHD17AQ96GS6 310 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 VPS50Q96JG6 964 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 CNDP1Q96KN2 507 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 KCNA7Q96RP8 456 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 HBEGFQ99075 208 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 SMAD5Q99717 465 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 MAPKAP1Q9BPZ7 522 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 ARHGAP9Q9BRR9 750 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 CENPKQ9BS16 269 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 NUDT9Q9BW91 350 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 MRPL1Q9BYD6 325 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 ACPTQ9BZG2 426 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 SLC25A18Q9H1K4 315 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 ZNF552Q9H707 407 aaPredicted RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 COPS7BQ9H9Q2 264 aaPredicted RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 NECTIN3Q9NQS3 549 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 PRDM9Q9NQV7 894 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 RIC8BQ9NVN3 520 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 CCL27Q9Y4X3 112 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 ASB4Q9Y574 426 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 TIMM22Q9Y584 194 aa8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 SPENQ96T58 3664 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 HELZ2Q9BYK8 2649 aaKnown RBP8.28□□□□□ -1.08
NSMCE1-206ENST00000563900 NSG1A0A0A6YYJ2 146 aa8.27□□□□□ -1.09
NSMCE1-206ENST00000563900 BLACEA4D250 179 aa8.27□□□□□ -1.09
NSMCE1-206ENST00000563900 PSMD12O00232 456 aaPredicted RBP8.27□□□□□ -1.09
NSMCE1-206ENST00000563900 PRMT3O60678 531 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms