RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PRDM9Q9NQV7 894 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 ABI3Q9P2A4 366 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 FETUBQ9UGM5 382 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 ZNF490Q9ULM2 529 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-204ENST00000561065 CENPEQ02224 2701 aa14.94□□□□□ -0.02
LMX1B-204ENST00000561065 HMX2A2RU54 273 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 NEURL1O76050 574 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 CERS1P27544 350 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 ECHS1P30084 290 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 PPP2R1BP30154 601 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 IRF9Q00978 393 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 CHIT1Q13231 466 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 E2F2Q14209 437 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 OR1C1Q15619 314 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 C1QL3Q5VWW1 255 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 ZNF787Q6DD87 383 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 MED27Q6P2C8 311 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 TRIM40Q6P9F5 258 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 CENPLQ8N0S6 344 aaPredicted RBP14.93□□□□□ -0.02
LMX1B-204ENST00000561065 CYP4X1Q8N118 509 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 FAM47BQ8NA70 645 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 ADAMTS18Q8TE60 1221 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 UBTD2Q8WUN7 234 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 SCMH1Q96GD3 660 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 KLHL1Q9NR64 748 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 ZNF223Q9UK11 482 aaPredicted RBP14.93□□□□□ -0.02
LMX1B-204ENST00000561065 MRPS33Q9Y291 106 aaKnown RBP14.93□□□□□ -0.02
LMX1B-204ENST00000561065 PCDHGA11Q9Y5H2 935 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 ITPR2Q14571 2701 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 MYO7BQ6PIF6 2116 aa14.93□□□□□ -0.02
LMX1B-204ENST00000561065 A8MUA0 341 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 TRIM49D1C9J1S8 452 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 UBXN8O00124 270 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 CLDN4O14493 209 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 RIPK2O43353 540 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 UGDHO60701 494 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ZG16O60844 167 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ALDOAP04075 364 aaKnown RBP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 TPP2P29144 1249 aaPredicted RBP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 PLA2G16P53816 162 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 PCDH1Q08174 1060 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 PFKFB4Q16877 469 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 TMEM35AQ53FP2 167 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 LIPJQ5W064 366 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 SPINK14Q6IE38 97 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ABHD17CQ6PCB6 329 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ZNF227Q86WZ6 799 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 LGI4Q8N135 537 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 SLC5A8Q8N695 610 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 APCDD1LQ8NCL9 501 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 OR2L5Q8NG80 312 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 SUN3Q8TAQ9 357 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ATP6V1E2Q96A05 226 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ISL2Q96A47 359 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 MRPL57Q9BQC6 102 aaKnown RBP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 REXO4Q9GZR2 422 aaKnown RBP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 CDCP1Q9H5V8 836 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 COPS7BQ9H9Q2 264 aaPredicted RBP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 MMACHCQ9Y4U1 282 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 SPACA6W5XKT8 324 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 B3GALT2O43825 422 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 UNC5CO95185 931 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 MTHFD2P13995 350 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 TAC1P20366 129 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 RAB38P57729 211 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 SLC29A2Q14542 456 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 SETDB1Q15047 1291 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 PCBP2Q15366 365 aaKnown RBP eCLIP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 TEX35Q5T0J7 233 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 C10orf62Q5T681 223 aaPredicted RBP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ADGRD1Q6QNK2 874 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 GFRALQ6UXV0 394 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ZNF793Q6ZN11 406 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 TIFABQ6ZNK6 161 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 UBE3DQ7Z6J8 389 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 FJX1Q86VR8 437 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 TEX9Q8N6V9 391 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 UHMK1Q8TAS1 419 aaKnown RBP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ACMSDQ8TDX5 336 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 FRMD6Q96NE9 622 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 KCNC2Q96PR1 638 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 F2RL3Q96RI0 385 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 UTP23Q9BRU9 249 aaKnown RBP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 MS4A8Q9BY19 250 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 ACTR8Q9H981 624 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 CPSF2Q9P2I0 782 aaKnown RBP14.92□□□□□ -0.02
LMX1B-204ENST00000561065 PCDHGB6Q9Y5F9 930 aa14.92□□□□□ -0.02
LMX1B-204ENST00000561065 NOTCH2Q04721 2471 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 CACNA1DQ01668 2161 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 NCOA6Q14686 2063 aaPredicted RBP14.91□□□□□ -0.02
LMX1B-204ENST00000561065 ASPDHA6ND91 283 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 CYR61O00622 381 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 MYO1DO94832 1006 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 CRYABP02511 175 aaKnown RBP14.91□□□□□ -0.02
LMX1B-204ENST00000561065 DCTP40126 519 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 LIM2P55344 173 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 MLF1P58340 268 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 TAS2R50P59544 299 aa14.91□□□□□ -0.02
LMX1B-204ENST00000561065 NAA30Q147X3 362 aaPredicted RBP14.91□□□□□ -0.02
LMX1B-204ENST00000561065 AP5B1Q2VPB7 878 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms