RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 RBP1P09455 135 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 LTA4HP09960 611 aaKnown RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 TPBGLP0DKB5 382 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 ATP6V0D1P61421 351 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 NAA25Q14CX7 972 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 ACAP2Q15057 778 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 EXT1Q16394 746 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 ZNF658BQ4V348 819 aaPredicted RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 FRMPD2BQ6IN97 320 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 UGT3A1Q6NUS8 523 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 KLC3Q6P597 504 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 TMEM205Q6UW68 189 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 PAMR1Q6UXH9 720 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 RAPH1Q70E73 1250 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 CPEB2Q7Z5Q1 589 aaKnown RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 LDB1Q86U70 411 aaPredicted RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 CDC20BQ86Y33 519 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 CRLF3Q8IUI8 442 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 PLD6Q8N2A8 252 aaKnown RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 NKAPQ8N5F7 415 aaKnown RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 LINC01555Q8NAE3 123 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 POGLUT1Q8NBL1 392 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 OR2L8Q8NGY9 312 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 RHEBL1Q8TAI7 183 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 PDLIM5Q96HC4 596 aaKnown RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 IMMP1LQ96LU5 166 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 IL17FQ96PD4 163 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 MIPEPQ99797 713 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 ZFYVE21Q9BQ24 234 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 MRPL57Q9BQC6 102 aaKnown RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 TGIF2Q9GZN2 237 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 NSRP1Q9H0G5 558 aaKnown RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 MRPL46Q9H2W6 279 aaKnown RBP8.73□□□□□ -1.01
SMAD3-215ENST00000560424 ENAMQ9NRM1 1142 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 CIDEBQ9UHD4 219 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 CRYL1Q9Y2S2 319 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 L3MBTL1Q9Y468 752 aa8.73□□□□□ -1.01
SMAD3-215ENST00000560424 LOC105369274A0A096LPK9 316 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 IGHV3-20A0A0C4DH32 117 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 LOC102723532A0A0G2JNH3 316 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 PHGDHO43175 533 aaKnown RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 CTSVO60911 334 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 H2AFYO75367 372 aaKnown RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 MED26O95402 600 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 OR56A5P0C7T3 313 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 PRSS56P0CW18 603 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 DRD4P21917 467 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 GRK2P25098 689 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 SERPINB5P36952 375 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 ZFP36L2P47974 494 aaKnown RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 CDKN1CP49918 316 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 CLCN7P51798 805 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 NUP107P57740 925 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 YBX1P67809 324 aaKnown RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 CTSL3PQ5NE16 218 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 ATG16L1Q676U5 607 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 LRRC8EQ6NSJ5 796 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 ARHGAP11AQ6P4F7 1023 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 PAOXQ6QHF9 649 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 FGD2Q7Z6J4 655 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 PIGWQ7Z7B1 504 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 DCUN1D3Q8IWE4 304 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 CHERPQ8IWX8 916 aaKnown RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 OR4N4Q8N0Y3 316 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 ARMC2Q8NEN0 867 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 MGARPQ8TDB4 240 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 BCAS4Q8TDM0 211 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 LRRC8CQ8TDW0 803 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 ZNF75CPQ92670 426 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 RERGQ96A58 199 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 CCDC126Q96EE4 140 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 LRRC46Q96FV0 321 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 C10orf90Q96M02 699 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 C7orf26Q96N11 449 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 PANX3Q96QZ0 392 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 CCT8L2Q96SF2 557 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 NDNQ99608 321 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 TSSK1BQ9BXA7 367 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 DERL2Q9GZP9 239 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 MANSC1Q9H8J5 431 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 KLF13Q9Y2Y9 288 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 DHRS7Q9Y394 339 aa8.72□□□□□ -1.01
SMAD3-215ENST00000560424 MAP1AP78559 2803 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-215ENST00000560424 VPS13CQ709C8 3753 aa8.71□□□□□ -1.01
SMAD3-215ENST00000560424 A6NNC1 897 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 G3V2L1 256 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 KLRC4-KLRK1H3BQV0 150 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 ARHGEF9O43307 516 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 HS6ST1O60243 411 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 NME2P1O60361 137 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 OR1I1O60431 355 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 EDF1O60869 148 aaKnown RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 SNNO75324 88 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 NEURL1O76050 574 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 TGDSO95455 350 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 LY6G6DO95868 133 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 F7P08709 466 aaPredicted RBP8.71□□□□□ -1.02
SMAD3-215ENST00000560424 SBK3P0C264 359 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 CCDC166P0CW27 439 aa8.71□□□□□ -1.02
SMAD3-215ENST00000560424 CPA3P15088 417 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms