RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 K7ENP7 123 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 SOCS6O14544 535 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 ATP8B1O43520 1251 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 B3GALT2O43825 422 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 B4GALT2O60909 372 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 ATP6AP2O75787 350 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 AIFM1O95831 613 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 ALBP02768 609 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 KLK1P06870 262 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 MAOAP21397 527 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 GRK2P25098 689 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 TACR1P25103 407 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 HK2P52789 917 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 RAB38P57729 211 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 CDC20Q12834 499 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 SLAMF1Q13291 335 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 PDCD2Q16342 344 aaPredicted RBP10.26□□□□□ -0.77
TPM1-217ENST00000559108 VWA5B1Q5TIE3 1220 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 CPZQ66K79 652 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 FAAH2Q6GMR7 532 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 INO80CQ6PI98 192 aaPredicted RBP10.26□□□□□ -0.77
TPM1-217ENST00000559108 RNF165Q6ZSG1 346 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 CHSY3Q70JA7 882 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 NUDT13Q86X67 352 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 CLYBLQ8N0X4 340 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 GOLGA6L1Q8N7Z2 621 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 PPP1R14CQ8TAE6 165 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 CKAP2Q8WWK9 683 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 TBC1D20Q96BZ9 403 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 FCRL1Q96LA6 429 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 PPP1R36Q96LQ0 422 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 MAGEB10Q96LZ2 347 aaPredicted RBP10.26□□□□□ -0.77
TPM1-217ENST00000559108 YIPF2Q9BWQ6 316 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 GPR87Q9BY21 358 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 MKKSQ9NPJ1 570 aaPredicted RBP10.26□□□□□ -0.77
TPM1-217ENST00000559108 NECTIN3Q9NQS3 549 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 HEY2Q9UBP5 337 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 VPS29Q9UBQ0 182 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 FBXW2Q9UKT8 454 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 RAP2CQ9Y3L5 183 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 CACNA1GO43497 2377 aa10.26□□□□□ -0.77
TPM1-217ENST00000559108 CPAMD8Q8IZJ3 1885 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 CDC14CA4D256 554 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 GLOD5A6NK44 160 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 NPIPB8E9PQR5 432 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 KLF11O14901 512 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 LSM1O15116 133 aaKnown RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 FHP07954 510 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 CELA2AP08217 269 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 HSD3B1P14060 373 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 PRPH2P23942 346 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 HSD3B2P26439 372 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 OTX2P32243 289 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 FOLR3P41439 243 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 RAP1GDS1P52306 607 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 ID2Q02363 134 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 DUSP2Q05923 314 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 CHAF1BQ13112 559 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 ATP1A4Q13733 1029 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 UGT8Q16880 541 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 COL28A1Q2UY09 1125 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 AP5B1Q2VPB7 878 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 RFTN2Q52LD8 501 aaPredicted RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 C10orf62Q5T681 223 aaPredicted RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 KIRREL2Q6UWL6 708 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 CCDC81Q6ZN84 652 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 MED25Q71SY5 747 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 CLNKQ7Z7G1 428 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 MRGPREQ86SM8 312 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 SCUBE1Q8IWY4 988 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.25□□□□□ -0.77
TPM1-217ENST00000559108 SNRNP27Q8WVK2 155 aaKnown RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 KIAA1143Q96AT1 154 aaPredicted RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 MIEF2Q96C03 454 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 TM4SF18Q96CE8 201 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 FAR2Q96K12 515 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 WDR77Q9BQA1 342 aaPredicted RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 CRB3Q9BUF7 120 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 NPLQ9BXD5 320 aaPredicted RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 PRORYQ9H606 182 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 INTS9Q9NV88 658 aaKnown RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 C5AR2Q9P296 337 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 GPN3Q9UHW5 284 aaPredicted RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 C3orf18Q9UK00 162 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 MKL2Q9ULH7 1088 aa10.25□□□□□ -0.77
TPM1-217ENST00000559108 POLR3HQ9Y535 204 aaPredicted RBP10.25□□□□□ -0.77
TPM1-217ENST00000559108 CROCCQ5TZA2 2017 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 URADA6NGE7 173 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 SDHDO14521 159 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 PGRMC2O15173 223 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 RRP8O43159 456 aaKnown RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 PROM1O43490 865 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 FGF17O60258 216 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 LDB3O75112 727 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 CRCPO75575 148 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 DNAJB5O75953 348 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 RSL1D1O76021 490 aaKnown RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 FAM58BPP0C7Q3 252 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 PRR35P0CG20 571 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 NEFHP12036 1026 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms