RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CLYBLQ8N0X4 340 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 METTL4Q8N3J2 472 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 ADAMTS18Q8TE60 1221 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 MAPKAP1Q9BPZ7 522 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 KCMF1Q9P0J7 381 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 MAN2B2Q9Y2E5 1009 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 HS3ST3B1Q9Y662 390 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 PEX12O00623 359 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 ITM2AO43736 263 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 LYPLA1O75608 230 aaPredicted RBP24.07■■□□□ 1.44
SMAD6-202ENST00000557916 HSPA4LO95757 839 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 EFNA3P52797 238 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 ABCE1P61221 599 aaKnown RBP24.07■■□□□ 1.44
SMAD6-202ENST00000557916 TBL3Q12788 808 aaKnown RBP24.07■■□□□ 1.44
SMAD6-202ENST00000557916 STX3Q13277 289 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 ATP1A4Q13733 1029 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 PAGE2Q7Z2X7 111 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 AGR3Q8TD06 166 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 FBXW2Q9UKT8 454 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 SPACA6W5XKT8 324 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 MGAQ8IWI9 3026 aa24.07■■□□□ 1.44
SMAD6-202ENST00000557916 A0A0A6YYD5 115 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 TMEM233B4DJY2 109 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 SOCS6O14544 535 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 ALOX12BO75342 701 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 CHEK2O96017 543 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 CYC1P08574 325 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 HMGCS1Q01581 520 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 CYP20A1Q6UW02 462 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 MED25Q71SY5 747 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 HOMEZQ8IX15 550 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 FAM47BQ8NA70 645 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 METTL21AQ8WXB1 218 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 ZNF395Q9H8N7 513 aaPredicted RBP24.06■■□□□ 1.44
SMAD6-202ENST00000557916 P4HTMQ9NXG6 502 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 ZDHHC2Q9UIJ5 367 aa24.06■■□□□ 1.44
SMAD6-202ENST00000557916 MRPS33Q9Y291 106 aaKnown RBP24.06■■□□□ 1.44
SMAD6-202ENST00000557916 CYR61O00622 381 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 PCDH17O14917 1159 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 GBAP04062 536 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 KLK1P06870 262 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 C8orf89P0DMQ9 161 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 SLC1A6P48664 564 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 RHAGQ02094 409 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 TBR1Q16650 682 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 IMPG1Q17R60 797 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 KIRREL2Q6UWL6 708 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 COMMD6Q7Z4G1 85 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 TRIM46Q7Z4K8 759 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 PLPP5Q8NEB5 264 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 CHTF18Q8WVB6 975 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 VPS50Q96JG6 964 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 CSF3RQ99062 836 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 MESP1Q9BRJ9 268 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 LYARQ9NX58 379 aaKnown RBP24.05■■□□□ 1.44
SMAD6-202ENST00000557916 ADAM29Q9UKF5 820 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 DNAJC15Q9Y5T4 150 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 CACNA1BQ00975 2339 aa24.05■■□□□ 1.44
SMAD6-202ENST00000557916 KMT2BQ9UMN6 2715 aaPredicted RBP24.05■■□□□ 1.44
SMAD6-202ENST00000557916 LOC400499M0QZD8 3231 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 ARGFXA6NJG6 315 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 TMPRSS11DO60235 418 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 PRMT3O60678 531 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 ITGB2P05107 769 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 CPN2P22792 545 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 BTG2P78543 158 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 BST1Q10588 318 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 UGT3A2Q3SY77 523 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 CCNYL2Q5T2Q4 361 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 BORAQ6PGQ7 559 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 TMEM205Q6UW68 189 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 QSOX2Q6ZRP7 698 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 GPR180Q86V85 440 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 C1orf52Q8N6N3 182 aaKnown RBP24.04■■□□□ 1.44
SMAD6-202ENST00000557916 EFCAB3Q8N7B9 438 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 EXTL1Q92935 676 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 C8orf44Q96CB5 159 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 PTCHD1Q96NR3 888 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 C20orf27Q9GZN8 174 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 MS4A12Q9NXJ0 267 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 PHF11Q9UIL8 331 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 KCNMB2Q9Y691 235 aa24.04■■□□□ 1.44
SMAD6-202ENST00000557916 ARHGAP10A1A4S6 786 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 CLDN4O14493 209 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 SNUPNO95149 360 aaKnown RBP24.03■■□□□ 1.44
SMAD6-202ENST00000557916 FAM58BPP0C7Q3 252 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 ACPPP15309 386 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 TPP2P29144 1249 aaPredicted RBP24.03■■□□□ 1.44
SMAD6-202ENST00000557916 HNRNPFP52597 415 aaKnown RBP24.03■■□□□ 1.44
SMAD6-202ENST00000557916 PPP2R2AP63151 447 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 BTKQ06187 659 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 NSDHLQ15738 373 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 SPDYAQ5MJ70 313 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 MRM1Q6IN84 353 aaKnown RBP24.03■■□□□ 1.44
SMAD6-202ENST00000557916 TRIM42Q8IWZ5 723 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 ZNF595Q8IYB9 648 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 TMEM52Q8NDY8 209 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 OR11G2Q8NGC1 345 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 APOBEC4Q8WW27 367 aaKnown RBP24.03■■□□□ 1.44
SMAD6-202ENST00000557916 PRDM9Q9NQV7 894 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms