RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PLPPR2Q96GM1 343 aa8.56□□□□□ -1.04
NEDD1-211ENST00000557454 PRAP1Q96NZ9 151 aa8.56□□□□□ -1.04
NEDD1-211ENST00000557454 TM9SF2Q99805 663 aa8.56□□□□□ -1.04
NEDD1-211ENST00000557454 C19orf43Q9BQ61 176 aa8.56□□□□□ -1.04
NEDD1-211ENST00000557454 TUBA1CQ9BQE3 449 aa8.56□□□□□ -1.04
NEDD1-211ENST00000557454 TMEM204Q9BSN7 226 aa8.56□□□□□ -1.04
NEDD1-211ENST00000557454 MANSC1Q9H8J5 431 aa8.56□□□□□ -1.04
NEDD1-211ENST00000557454 HOMER3Q9NSC5 361 aa8.56□□□□□ -1.04
NEDD1-211ENST00000557454 NLE1Q9NVX2 485 aaPredicted RBP8.56□□□□□ -1.04
NEDD1-211ENST00000557454 PPIEQ9UNP9 301 aaKnown RBP8.56□□□□□ -1.04
NEDD1-211ENST00000557454 ATP6V1DQ9Y5K8 247 aa8.56□□□□□ -1.04
NEDD1-211ENST00000557454 LOC100289279A0A1B0GTE1 492 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 A0A1W2PNV4 684 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 FAM157AC9JC47 383 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 C16orf97H3BN30 126 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 MYO1FO00160 1098 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 TRAPPC6AO75865 159 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 LRATO95237 230 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 CCDC172P0C7W6 258 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 CCDC166P0CW27 439 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 CYP4B1P13584 511 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 MSNP26038 577 aaKnown RBP8.55□□□□□ -1.04
NEDD1-211ENST00000557454 EEF1GP26641 437 aaKnown RBP8.55□□□□□ -1.04
NEDD1-211ENST00000557454 AOAHP28039 575 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 FOXN2P32314 431 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 PCYT1AP49585 367 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 GEMP55040 296 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 EIF3BP55884 814 aaKnown RBP8.55□□□□□ -1.04
NEDD1-211ENST00000557454 RPS15AP62244 130 aaKnown RBP8.55□□□□□ -1.04
NEDD1-211ENST00000557454 DEFB134Q4QY38 66 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 ERICH6BQ5W0A0 696 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 VWA1Q6PCB0 445 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 CLEC2AQ6UVW9 174 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 ZNF571Q7Z3V5 609 aaPredicted RBP8.55□□□□□ -1.04
NEDD1-211ENST00000557454 BANPQ8N9N5 519 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 CAMKVQ8NCB2 501 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 PPFIBP2Q8ND30 876 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 GSDMBQ8TAX9 411 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 ZPLD1Q8TCW7 415 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 TFB1MQ8WVM0 346 aaKnown RBP8.55□□□□□ -1.04
NEDD1-211ENST00000557454 CDKN2AIPNLQ96HQ2 116 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 OCSTAMPQ9BR26 566 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 OPN3Q9H1Y3 402 aaPredicted RBP8.55□□□□□ -1.04
NEDD1-211ENST00000557454 ALG2Q9H553 416 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 PROK2Q9HC23 129 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 ZFATQ9P243 1243 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 SAE1Q9UBE0 346 aaPredicted RBP8.55□□□□□ -1.04
NEDD1-211ENST00000557454 MRFAP1Q9Y605 127 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 SLC22A7Q9Y694 548 aa8.55□□□□□ -1.04
NEDD1-211ENST00000557454 EPN1Q9Y6I3 576 aaPredicted RBP8.55□□□□□ -1.04
NEDD1-211ENST00000557454 FRG2CA6NGY1 282 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 ELOA3DA6NLF2 546 aaPredicted RBP8.54□□□□□ -1.04
NEDD1-211ENST00000557454 F8W8V4 182 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 GALR3O60755 368 aaPredicted RBP8.54□□□□□ -1.04
NEDD1-211ENST00000557454 SLC25A16P16260 332 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 COILP38432 576 aaPredicted RBP8.54□□□□□ -1.04
NEDD1-211ENST00000557454 KCNJ5P48544 419 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 GZMKP49863 264 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 NUDT6P53370 316 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 ABATP80404 500 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 HERC3Q15034 1050 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 KRT31Q15323 416 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 CR1LQ2VPA4 569 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 ELOA3BQ3SY89 546 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 NHSL2Q5HYW2 709 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 SLC22A10Q63ZE4 541 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 DENND5AQ6IQ26 1287 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 OPN5Q6U736 354 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 HSDL2Q6YN16 418 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 CLEC17AQ6ZS10 378 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 ASPGQ86U10 573 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 LDB1Q86U70 411 aaPredicted RBP8.54□□□□□ -1.04
NEDD1-211ENST00000557454 RFX6Q8HWS3 928 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 AFAP1L2Q8N4X5 818 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 MLKLQ8NB16 471 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 ZNF740Q8NDX6 193 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 ELOA3Q8NG57 546 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 OR9A1PQ8NGU1 263 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 LILRB1Q8NHL6 650 aaPredicted RBP8.54□□□□□ -1.04
NEDD1-211ENST00000557454 RAB3IL1Q8TBN0 382 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 MAGEC3Q8TD91 643 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 PAQR8Q8TEZ7 354 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 SMAP2Q8WU79 429 aaPredicted RBP8.54□□□□□ -1.04
NEDD1-211ENST00000557454 UCN3Q969E3 161 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 CAVIN3Q969G5 261 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 FBXW5Q969U6 566 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 STARD4Q96DR4 205 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 TM4SF19Q96DZ7 209 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 EBNA1BP2Q99848 306 aaKnown RBP8.54□□□□□ -1.04
NEDD1-211ENST00000557454 TSSK1BQ9BXA7 367 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 GBA3Q9H227 469 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 RHBGQ9H310 441 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 ACBD3Q9H3P7 528 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 HAUS4Q9H6D7 363 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 MAPRE3Q9UPY8 281 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 DTX4Q9Y2E6 619 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 PCDHGB1Q9Y5G3 927 aa8.54□□□□□ -1.04
NEDD1-211ENST00000557454 KCNE1BA0A087WTH5 132 aa8.53□□□□□ -1.04
NEDD1-211ENST00000557454 A0A1W2PP18 115 aa8.53□□□□□ -1.04
NEDD1-211ENST00000557454 C3orf70A6NLC5 250 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms