RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 DLK1P80370 383 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 POU5F1Q01860 360 aaKnown RBP3.14□□□□□ -1.91
VRK1-207ENST00000557352 RASGEF1BQ0VAM2 473 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 STK4Q13043 487 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 C6orf163Q5TEZ5 329 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 OR4C11Q6IEV9 310 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 TCEANCQ8N8B7 351 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 RASGEF1AQ8N9B8 481 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 CSNK1G2-AS1Q8NCQ2 148 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 RHOXF1Q8NHV9 184 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 SPPL2AQ8TCT8 520 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 SSC4DQ8WTU2 575 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 KCNE4Q8WWG9 221 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 FEVQ99581 238 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 CPNE1Q99829 537 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 NUDT16L1Q9BRJ7 211 aaKnown RBP3.14□□□□□ -1.91
VRK1-207ENST00000557352 PI4K2AQ9BTU6 479 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 CCDC28BQ9BUN5 200 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 GSN-AS1Q9NRJ2 163 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 HACD3Q9P035 362 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 NARFQ9UHQ1 456 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 PPIEQ9UNP9 301 aaKnown RBP3.14□□□□□ -1.91
VRK1-207ENST00000557352 KIF25-AS1Q9Y6Z4 181 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 UBN2Q6ZU65 1347 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 SH3TC1Q8TE82 1336 aa3.14□□□□□ -1.91
VRK1-207ENST00000557352 SBF1O95248 1867 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 GON4LQ3T8J9 2241 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 CARMIL3Q8ND23 1372 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 TRIM49BA6NDI0 452 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 SURF6O75683 361 aaKnown RBP3.13□□□□□ -1.91
VRK1-207ENST00000557352 MX1P20591 662 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 CETN2P41208 172 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 NDUFV3P56181 108 aaKnown RBP3.13□□□□□ -1.91
VRK1-207ENST00000557352 OR1D5P58170 312 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 AIMP1Q12904 312 aaKnown RBP3.13□□□□□ -1.91
VRK1-207ENST00000557352 KIAA0141Q14154 515 aaPredicted RBP3.13□□□□□ -1.91
VRK1-207ENST00000557352 VWC2Q2TAL6 325 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 PRR30Q53SZ7 412 aaPredicted RBP3.13□□□□□ -1.91
VRK1-207ENST00000557352 SLC10A5Q5PT55 438 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 CFAP58Q5T655 872 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 FHL5Q5TD97 284 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 RNLSQ5VYX0 342 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 CTR9Q6PD62 1173 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 TMED8Q6PL24 325 aaPredicted RBP3.13□□□□□ -1.91
VRK1-207ENST00000557352 CATSPER3Q86XQ3 398 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 LRTM2Q8N967 370 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 SYT2Q8N9I0 419 aaPredicted RBP3.13□□□□□ -1.91
VRK1-207ENST00000557352 ABHD1Q96SE0 405 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 UBAC1Q9BSL1 405 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 GPR88Q9GZN0 384 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 TMX4Q9H1E5 349 aaPredicted RBP3.13□□□□□ -1.91
VRK1-207ENST00000557352 TBC1D13Q9NVG8 400 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 SWAP70Q9UH65 585 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 PCDHGB4Q9UN71 923 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 SLX4Q8IY92 1834 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 NAV1Q8NEY1 1877 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 RAD50Q92878 1312 aa3.13□□□□□ -1.91
VRK1-207ENST00000557352 DDX60LQ5H9U9 1706 aaKnown RBP3.13□□□□□ -1.91
VRK1-207ENST00000557352 SCN9AQ15858 1988 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 COL4A1P02462 1669 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 HIP1O00291 1037 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 CYTIPO60759 359 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 PRDM1O75626 825 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 ATP6AP2O75787 350 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 REC8O95072 547 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 CYP11B2P19099 503 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 NONOQ15233 471 aaKnown RBP eCLIP3.12□□□□□ -1.91
VRK1-207ENST00000557352 TMEM266Q2M3C6 531 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 CCDC57Q2TAC2 916 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 CASC1Q6TDU7 716 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 RYBPQ8N488 228 aaPredicted RBP3.12□□□□□ -1.91
VRK1-207ENST00000557352 C4orf32Q8N8J7 132 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 TEKT4Q8WW24 435 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 ROBO4Q8WZ75 1007 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 PROX1Q92786 737 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 DGAT2Q96PD7 388 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 BTBD9Q96Q07 612 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 GCNAQ96QF7 691 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 UTP14AQ9BVJ6 771 aaKnown RBP3.12□□□□□ -1.91
VRK1-207ENST00000557352 CNOT10Q9H9A5 744 aaKnown RBP3.12□□□□□ -1.91
VRK1-207ENST00000557352 ZNF581Q9P0T4 197 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 POMT2Q9UKY4 750 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 EXOC6BQ9Y2D4 811 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 MYH4Q9Y623 1939 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 TIAM2Q8IVF5 1701 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 MROH5Q6ZUA9 1318 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 RALGAPA1Q6GYQ0 2036 aa3.12□□□□□ -1.91
VRK1-207ENST00000557352 TRAV24A0A0B4J272 114 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 ARHGEF33A8MVX0 844 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 RPS6KA5O75582 802 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 ANP32AP39687 249 aaKnown RBP3.11□□□□□ -1.91
VRK1-207ENST00000557352 NDPQ00604 133 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 IL11RAQ14626 422 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 PTPRCAPQ14761 206 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 DUSP5Q16690 384 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 UPP1Q16831 310 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 CRY2Q49AN0 593 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 CCDC152Q4G0S7 254 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 ATP1A1-AS1Q5TC04 95 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 CYB5D1Q6P9G0 228 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms