RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 RAB8AP61006 207 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 ALDH6A1Q02252 535 aaKnown RBP16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 DOK4Q8TEW6 326 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 KCNK12Q9HB15 430 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 ACER3Q9NUN7 267 aa16.32■□□□□ 0.2
PPP4R3A-208ENST00000555462 ZNF821O75541 412 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 GABRR2P28476 465 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 ZNF45Q02386 682 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 ARMCX6Q7L4S7 300 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 RAB43Q86YS6 212 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 FAM20CQ8IXL6 584 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 ASCC1Q8N9N2 400 aaKnown RBP16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 GATAD2BQ8WXI9 593 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 KLF16Q9BXK1 252 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 GABARAPL1Q9H0R8 117 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 HHATLQ9HCP6 504 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 A0A1W2PQL4 384 aaPredicted RBP16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 PTTG1O95997 202 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 GSTM1P09488 218 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 TSPAN19P0C672 248 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 IL7P13232 177 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 CD79BP40259 229 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 LIM2P55344 173 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 TARDBPQ13148 414 aaKnown RBP eCLIP16.31■□□□□ 0.23e-6■■■□□ 15.1
PPP4R3A-208ENST00000555462 VEPH1Q14D04 833 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 ASB15Q8WXK1 588 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 OPALINQ96PE5 141 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 SIGLEC11Q96RL6 698 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 QRSL1Q9H0R6 528 aaKnown RBP16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 ANKRA2Q9H9E1 313 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 YIPF1Q9Y548 306 aa16.31■□□□□ 0.2
PPP4R3A-208ENST00000555462 SGTAO43765 313 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 EOMESO95936 686 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 IGSF6O95976 241 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 C1SP09871 688 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 APEX1P27695 318 aaKnown RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 RUNX1T1Q06455 604 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 SLBPQ14493 270 aaKnown RBP eCLIP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 MPEG1Q2M385 716 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 GCNT6Q5T4J0 391 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 PPP2R2DQ66LE6 453 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 USP30Q70CQ3 517 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 COMMD6Q7Z4G1 85 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 OR2AP1Q8NGE2 309 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 TP53INP1Q96A56 240 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 CLN6Q9NWW5 311 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 RUVBL1Q9Y265 456 aaKnown RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 SPIN1Q9Y657 262 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 A0A1W2PRU2 124 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 PSKH1P11801 424 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 ZNF8P17098 575 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 METAP1P53582 386 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 CDC20Q12834 499 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 ZNF79Q15937 498 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 CDKN3Q16667 212 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 TRIM71Q2Q1W2 868 aaKnown RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 REM2Q8IYK8 340 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 CFAP206Q8IYR0 622 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 TMEM159Q96B96 161 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 ST6GAL2Q96JF0 529 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 C11orf54Q9H0W9 315 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 SUV39H2Q9H5I1 410 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 RPRD1BQ9NQG5 326 aaKnown RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 CCL26Q9Y258 94 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 SLC45A1Q9Y2W3 748 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 OR51B4Q9Y5P0 310 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 ISPDA4D126 451 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 M0R3H8 397 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 SLITRK5O94991 958 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 HBQ1P09105 142 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 CCNYL3P0C7X3 344 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 SDC2P34741 201 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 OPRD1P41143 372 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 AP1S1P61966 158 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 ATAT1Q5SQI0 421 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 LHFPL3Q86UP9 236 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 KIAA1958Q8N8K9 716 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 OR5D16Q8NGK9 328 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 ALG14Q96F25 216 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 PITX2Q99697 317 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 VN1R3Q9BXE9 311 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 RSPO3Q9BXY4 272 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 RACGAP1Q9H0H5 632 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 IRF2BPLQ9H1B7 796 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 MIEF1Q9NQG6 463 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 TMEM98Q9Y2Y6 226 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 SCN8AQ9UQD0 1980 aa16.3■□□□□ 0.2
PPP4R3A-208ENST00000555462 NEDD8-MDP1E9PL57 170 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 DVL2O14641 736 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 FFAR1O14842 300 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 PPM1DO15297 605 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 PQBP1O60828 265 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 PRKRAO75569 313 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 SEMG1P04279 462 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 RPS3P23396 243 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 FKBP1BP68106 108 aa16.29■□□□□ 0.2
PPP4R3A-208ENST00000555462 PDZK1Q5T2W1 519 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms