RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 GIMAP5Q96F15 307 aa4.78□□□□□ -1.64
PSEN1-211ENST00000554995 NECTIN4Q96NY8 510 aa4.78□□□□□ -1.64
PSEN1-211ENST00000554995 IL12RB2Q99665 862 aa4.78□□□□□ -1.64
PSEN1-211ENST00000554995 NKX3-1Q99801 234 aaPredicted RBP4.78□□□□□ -1.64
PSEN1-211ENST00000554995 FUNDC2Q9BWH2 189 aa4.78□□□□□ -1.64
PSEN1-211ENST00000554995 COQ10BQ9H8M1 238 aa4.78□□□□□ -1.64
PSEN1-211ENST00000554995 MAN2C1Q9NTJ4 1040 aa4.78□□□□□ -1.64
PSEN1-211ENST00000554995 MSGN1A6NI15 193 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 SMIM1B2RUZ4 78 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 P2RY10O00398 339 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 ACOT8O14734 319 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 IKBKBO14920 756 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 P2RX6O15547 441 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 GRID2O43424 1007 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 SCGB2A1O75556 95 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 TRMUO75648 421 aaKnown RBP4.77□□□□□ -1.65
PSEN1-211ENST00000554995 SYNGR4O95473 234 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 TXNDC12O95881 172 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 CLPTM1O96005 669 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 PAK4O96013 591 aaPredicted RBP4.77□□□□□ -1.65
PSEN1-211ENST00000554995 AK1P00568 194 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 VTNP04004 478 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 PROS1P07225 676 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 UMODP07911 640 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 FAM200BP0CF97 657 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 ZCCHC18P0CG32 403 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 SNHG28P0DPA3 235 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 MAGEA4P43358 317 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 GABPB1Q06547 395 aaPredicted RBP4.77□□□□□ -1.65
PSEN1-211ENST00000554995 SCGB2A2Q13296 93 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 GPAT3Q53EU6 434 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 C9orf50Q5SZB4 431 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 TEX35Q5T0J7 233 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 CAPN13Q6MZZ7 669 aaPredicted RBP4.77□□□□□ -1.65
PSEN1-211ENST00000554995 ZNF790Q6PG37 636 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 RFPL4BQ6ZWI9 263 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 AMZ2Q86W34 360 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 MINDY2Q8NBR6 621 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 OR6M1Q8NGM8 313 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 ZNF274Q96GC6 653 aaPredicted RBP4.77□□□□□ -1.65
PSEN1-211ENST00000554995 RPGRIP1Q96KN7 1286 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 LURAP1Q96LR2 239 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 TDRD1Q9BXT4 1180 aaKnown RBP4.77□□□□□ -1.65
PSEN1-211ENST00000554995 PITPNM3Q9BZ71 974 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 ROPN1Q9HAT0 212 aaPredicted RBP4.77□□□□□ -1.65
PSEN1-211ENST00000554995 SLC52A3Q9NQ40 469 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 ZNF624Q9P2J8 865 aaPredicted RBP4.77□□□□□ -1.65
PSEN1-211ENST00000554995 EPHA6Q9UF33 1036 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 MRTO4Q9UKD2 239 aaKnown RBP4.77□□□□□ -1.65
PSEN1-211ENST00000554995 U3KQV3 271 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 DISP3Q9P2K9 1392 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 NPC1L1Q9UHC9 1359 aa4.77□□□□□ -1.65
PSEN1-211ENST00000554995 NEDD4P46934 1319 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 STK36Q9NRP7 1315 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 CHEK1O14757 476 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 B4GAT1O43505 415 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 LRCH4O75427 683 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 CDC123O75794 336 aaPredicted RBP4.76□□□□□ -1.65
PSEN1-211ENST00000554995 CALCAP01258 141 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 RALAP11233 206 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 GNSP15586 552 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 GPX3P22352 226 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 MTTPP55157 894 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 ERVFC1-1P60608 527 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 TRA2BP62995 288 aaKnown RBP4.76□□□□□ -1.65
PSEN1-211ENST00000554995 MFGE8Q08431 387 aaPredicted RBP4.76□□□□□ -1.65
PSEN1-211ENST00000554995 PDZK1IP1Q13113 114 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 PDIA5Q14554 519 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 MEF2DQ14814 521 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 EXOSC7Q15024 291 aaKnown RBP4.76□□□□□ -1.65
PSEN1-211ENST00000554995 OR1C1Q15619 314 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 ANKDD1AQ495B1 522 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 FAM106AQ4KMX7 169 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 ATP1A1-AS1Q5TC04 95 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 SLC35E4Q6ICL7 350 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 AFTPHQ6ULP2 937 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 CDHR3Q6ZTQ4 885 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 MCM10Q7L590 875 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 SMIM29Q86T20 159 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 ELMOD1Q8N336 334 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 LRRC17Q8N6Y2 441 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 FAM71CQ8NEG0 241 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 U2AF1L4Q8WU68 220 aaKnown RBP4.76□□□□□ -1.65
PSEN1-211ENST00000554995 GATAD1Q8WUU5 269 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 SELENOMQ8WWX9 145 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 FCGR1BQ92637 280 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 TRIM44Q96DX7 344 aaPredicted RBP4.76□□□□□ -1.65
PSEN1-211ENST00000554995 NAF1Q96HR8 494 aaKnown RBP4.76□□□□□ -1.65
PSEN1-211ENST00000554995 VPS39Q96JC1 886 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 MARK4Q96L34 752 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 C2orf48Q96LS8 159 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 ERGIC2Q96RQ1 377 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 JPH2Q9BR39 696 aaPredicted RBP4.76□□□□□ -1.65
PSEN1-211ENST00000554995 THUMPD2Q9BTF0 503 aaKnown RBP4.76□□□□□ -1.65
PSEN1-211ENST00000554995 SLC26A1Q9H2B4 701 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 S100A14Q9HCY8 104 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 TBK1Q9UHD2 729 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 ENTPD4Q9Y227 616 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 SELENOKQ9Y6D0 94 aa4.76□□□□□ -1.65
PSEN1-211ENST00000554995 NCAPD2Q15021 1401 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms