RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ERVK-10P10266 1014 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 CEACAM1P13688 526 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 NUMBP49757 651 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 ERVFC1-1P60608 527 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 SCGB2A2Q13296 93 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 MEF2DQ14814 521 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 TMEM132DQ14C87 1099 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 HEPACAMQ14CZ8 416 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 TEX35Q5T0J7 233 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 TMEM64Q6YI46 380 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 TRMT1LQ7Z2T5 733 aaKnown RBP4.43□□□□□ -1.7
SCFD1-209ENST00000553280 ADGRD2Q7Z7M1 963 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 ELMOD1Q8N336 334 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 GPRC5AQ8NFJ5 357 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 OR56B1Q8NGI3 324 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 DQX1Q8TE96 717 aaKnown RBP4.43□□□□□ -1.7
SCFD1-209ENST00000553280 GATAD1Q8WUU5 269 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 ZNRF4Q8WWF5 429 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 PCDHB18PQ96TA0 734 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 TDRD1Q9BXT4 1180 aaKnown RBP4.43□□□□□ -1.7
SCFD1-209ENST00000553280 NMNAT2Q9BZQ4 307 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 CCSER1Q9C0I3 900 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF556Q9HAH1 456 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF624Q9P2J8 865 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-209ENST00000553280 ANKMY1Q9P2S6 941 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 CLIP2Q9UDT6 1046 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 NARFQ9UHQ1 456 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF580Q9UK33 172 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 PLA2G4CQ9UP65 541 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 SELENOKQ9Y6D0 94 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 ARID2Q68CP9 1835 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 NCAPD2Q15021 1401 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 NEDD4P46934 1319 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 FGD5Q6ZNL6 1462 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 RAD54L2Q9Y4B4 1467 aa4.43□□□□□ -1.7
SCFD1-209ENST00000553280 IGKV2D-30A0A075B6S6 120 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 KHDRBS3O75525 346 aaKnown RBP4.42□□□□□ -1.7
SCFD1-209ENST00000553280 AP2A2O94973 939 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 DIRAS3O95661 229 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 PRSS1P07477 247 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 UMODP07911 640 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 CCKARP32238 428 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 HSPA1LP34931 641 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 MDH1P40925 334 aaKnown RBP4.42□□□□□ -1.7
SCFD1-209ENST00000553280 SOX3P41225 446 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 CCL11P51671 97 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 PDZK1IP1Q13113 114 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 PDIA5Q14554 519 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 RBBP5Q15291 538 aaKnown RBP4.42□□□□□ -1.7
SCFD1-209ENST00000553280 ZRSR1Q15695 479 aaKnown RBP4.42□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF672Q499Z4 452 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-209ENST00000553280 FAM106AQ4KMX7 169 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 MPPE1Q53F39 396 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 ATP1A1-AS1Q5TC04 95 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 HIST2H2AA3Q6FI13 130 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 CAPN13Q6MZZ7 669 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-209ENST00000553280 TMEM26Q6ZUK4 368 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 SH2D5Q6ZV89 423 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 SLC26A9Q7LBE3 791 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 SMIM29Q86T20 159 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 C17orf64Q86WR6 236 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF540Q8NDQ6 660 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 TRIM58Q8NG06 486 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 OR4D10Q8NGI6 311 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 OR10G8Q8NGN5 311 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 SMPDL3AQ92484 453 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 OMA1Q96E52 524 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 NECTIN4Q96NY8 510 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 ERGIC2Q96RQ1 377 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 AGPAT1Q99943 283 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 CBWD1Q9BRT8 395 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 MMP28Q9H239 520 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 SLC26A1Q9H2B4 701 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 ZNF334Q9HCZ1 680 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-209ENST00000553280 SLC35D1Q9NTN3 355 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 VPS54Q9P1Q0 977 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 KIAA1210Q9ULL0 1709 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 ENTPD4Q9Y227 616 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 OR1A2Q9Y585 309 aa4.42□□□□□ -1.7
SCFD1-209ENST00000553280 TRIP12Q14669 1992 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-209ENST00000553280 NPC1L1Q9UHC9 1359 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 TMEM89A2RUT3 159 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 SLC1A7O00341 560 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 CCSO14618 274 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 ECE2O60344 883 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 TRMUO75648 421 aaKnown RBP4.41□□□□□ -1.7
SCFD1-209ENST00000553280 CDC123O75794 336 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-209ENST00000553280 SYNGR4O95473 234 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 PRDX6P30041 224 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 PKLRP30613 574 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 FEN1P39748 380 aaKnown RBP4.41□□□□□ -1.7
SCFD1-209ENST00000553280 ALDH3B1P43353 468 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 MAGEA4P43358 317 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 GEMP55040 296 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 CSNK2BP67870 215 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 GABPB1Q06547 395 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-209ENST00000553280 HSPA14Q0VDF9 509 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 DRP2Q13474 957 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 OR1C1Q15619 314 aa4.41□□□□□ -1.7
SCFD1-209ENST00000553280 C3AR1Q16581 482 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms