RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ATP13A5Q4VNC0 1218 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 TFDP3Q5H9I0 405 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 SEL1L2Q5TEA6 688 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 CST9LP1Q5W188 147 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 IYDQ6PHW0 289 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 RBPMS2Q6ZRY4 209 aaKnown RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 LDB1Q86U70 411 aaPredicted RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 TUSC5Q8IXB3 177 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 NDUFAF2Q8N183 169 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 UMODL1-AS1Q8N2C9 162 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 SLC25A41Q8N5S1 370 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 SETD6Q8TBK2 473 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 PTP4A1Q93096 173 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 FBXL8Q96CD0 374 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 FAF2Q96CS3 445 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 SMIM14Q96QK8 99 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 NAPGQ99747 312 aaPredicted RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 MGME1Q9BQP7 344 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 TRPV5Q9NQA5 729 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 ERVK-11Q9UQG0 969 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 STON1Q9Y6Q2 735 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 DOCK4Q8N1I0 1966 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 NYNRINQ9P2P1 1898 aaKnown RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 MUC6Q6W4X9 2439 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 A0A0U1RQS6 177 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 CPED1A4D0V7 1026 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 ADAM10O14672 748 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 TOP3BO95985 862 aaKnown RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 JCHAINP01591 159 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 PRKCGP05129 697 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 SRCP12931 536 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 HOXB2P14652 356 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 ETS1P14921 441 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 ADARP55265 1226 aaKnown RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 TRIP13Q15645 432 aaPredicted RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 RAPH1Q70E73 1250 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 SETD3Q86TU7 594 aaPredicted RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 SLC13A5Q86YT5 568 aaPredicted RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 PSTKQ8IV42 348 aaKnown RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 STK40Q8N2I9 435 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 RASGEF1CQ8N431 466 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 FAM47BQ8NA70 645 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 DCAF4L2Q8NA75 395 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 WDR20Q8TBZ3 569 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 HM13Q8TCT9 377 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 RLN3Q8WXF3 142 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 NSMCE3Q96MG7 304 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 AGAP3Q96P47 875 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 ESRP2Q9H6T0 727 aaKnown RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 NT5MQ9NPB1 228 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 NRIP3Q9NQ35 241 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 ACSS1Q9NUB1 689 aaPredicted RBP3.61□□□□□ -1.83
APAF1-208ENST00000549007 PLA2G4CQ9UP65 541 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 TSC22D4Q9Y3Q8 395 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 JRKLQ9Y4A0 524 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 LIPGQ9Y5X9 500 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 NUMA1Q14980 2115 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 SHROOM3Q8TF72 1996 aa3.61□□□□□ -1.83
APAF1-208ENST00000549007 TCRBV21S2A2A0A5A6 115 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CTAGE9A4FU28 777 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 GOLGA6L9A6NEM1 432 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PRR23AA6NEV1 266 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ARHGAP42A6NI28 874 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 DBX1A6NMT0 343 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 MAGEB17A8MXT2 336 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 POC1B-GALNT4F8VUJ3 575 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 TIMM23O14925 209 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PIGNO95427 931 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SLC4A1P02730 911 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ATP5DP30049 168 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 CASQ1P31415 396 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PSMD8P48556 350 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 HCAR3P49019 387 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 EIF3EP60228 445 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 RHOAP61586 193 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ST8SIA6P61647 398 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SRSF5Q13243 272 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 DMC1Q14565 340 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PAFAH1B3Q15102 231 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 CYTH1Q15438 398 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 TAZQ16635 292 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 MIDNQ504T8 468 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 C22orf39Q6P5X5 142 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 PGBD5Q8N414 524 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 DEFB119Q8N690 84 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 TMCO5AQ8N6Q1 288 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 P3H4Q92791 437 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SLC41A2Q96JW4 573 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 TMEM121Q9BTD3 319 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SLC2A11Q9BYW1 496 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 ZDHHC6Q9H6R6 413 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 TMEM184CQ9NVA4 438 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 GAR1Q9NY12 217 aaKnown RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 UBA2Q9UBT2 640 aaPredicted RBP3.6□□□□□ -1.83
APAF1-208ENST00000549007 RAPGEFL1Q9UHV5 662 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 LCMT1Q9UIC8 334 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 DNPEPQ9ULA0 475 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 SNX12Q9UMY4 172 aa3.6□□□□□ -1.83
APAF1-208ENST00000549007 KIAA1549LQ6ZVL6 1849 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms