RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 GAREM2Q75VX8 874 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 TMCO2Q7Z6W1 182 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 RASGRP3Q8IV61 690 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLC44A2Q8IWA5 706 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 TAGAPQ8N103 731 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 RASGEF1AQ8N9B8 481 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 PIK3R3Q92569 461 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 TMEM159Q96B96 161 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 SORBS1Q9BX66 1292 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 BHLHE41Q9C0J9 482 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 RERGLQ9H628 205 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 SNTG1Q9NSN8 517 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 BOLA1Q9Y3E2 137 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 INSL5Q9Y5Q6 135 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 PLXND1Q9Y4D7 1925 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 NPC1O15118 1278 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 KPNA5O15131 536 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 KLHL18O94889 574 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 SNX4O95219 450 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 FURINP09958 794 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 MXD1Q05195 221 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 ZNF33BQ06732 778 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 FCHO2Q0JRZ9 810 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 PUM1Q14671 1186 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 SPOUT1Q5T280 376 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 UBQLNLQ8IYU4 475 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLC34A3Q8N130 599 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 PPCDCQ96CD2 204 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 TRNT1Q96Q11 434 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 SPNS1Q9H2V7 528 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 ATP6V1HQ9UI12 483 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 ENPP4Q9Y6X5 453 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 C5orf42Q9H799 3197 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 OBSL1O75147 1896 aa13.51□□□□□ -0.25
RAPGEF3-218ENST00000548919 TFECO14948 347 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 OLFM2O95897 454 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 KLK1P06870 262 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 CHRM5P08912 532 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 PTX3P26022 381 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 RFX2P48378 723 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 KRR1Q13601 381 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 MED27Q6P2C8 311 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 PAQR6Q6TCH4 344 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 C9orf43Q8TAL5 461 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 ASB15Q8WXK1 588 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 RSPO3Q9BXY4 272 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 TIGARQ9NQ88 270 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 SPATA7Q9P0W8 599 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLITRK5O94991 958 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 POP4O95707 220 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 CATP04040 527 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 RACK1P63244 317 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 TEKQ02763 1124 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLBPQ14493 270 aaKnown RBP eCLIP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 SEC23BQ15437 767 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 UAP1L1Q3KQV9 507 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 TIMM50Q3ZCQ8 353 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 TPGS2Q68CL5 300 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 TRIM40Q6P9F5 258 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 OXR1Q8N573 874 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 CELF5Q8N6W0 485 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 OR56A3Q8NH54 315 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 GOT1L1Q8NHS2 421 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 MAPKAP1Q9BPZ7 522 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 MRPL17Q9NRX2 175 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 CNOT2Q9NZN8 540 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 HS3ST2Q9Y278 367 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 KCNE2Q9Y6J6 123 aa13.5□□□□□ -0.25
RAPGEF3-218ENST00000548919 HOXA2O43364 376 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 GPR37L1O60883 481 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CSO75390 466 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 PTPN2P17706 415 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 OPRD1P41143 372 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 HMGA2P52926 109 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 TBPL1P62380 186 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 LRRC74AQ0VAA2 488 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 ZNF79Q15937 498 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CRB2Q5IJ48 1285 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 ZNF770Q6IQ21 691 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 GDPD4Q6W3E5 623 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 DEFB128Q7Z7B8 93 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLC43A3Q8NBI5 491 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 ZNF740Q8NDX6 193 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 C16orf78Q8WTQ4 265 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 ZNF480Q8WV37 535 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 MTG2Q9H4K7 406 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 TMEM38AQ9H6F2 299 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 RMI1Q9H9A7 625 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 TAS2R9Q9NYW1 312 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 AP1M2Q9Y6Q5 423 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 V9GYH0 126 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 SH3D21A4FU49 640 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 SEMA7AO75326 666 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 SEMA3DO95025 777 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 IFNW1P05000 195 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 SCG5P05408 212 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 URODP06132 367 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms