RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 LRRC34Q8IZ02 419 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 ENDOVQ8N8Q3 282 aaKnown RBP19.9■□□□□ 0.78
CACNB3-210ENST00000548874 ADAMTS18Q8TE60 1221 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 TBC1D20Q96BZ9 403 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 TUBGCP3Q96CW5 907 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 PEX11GQ96HA9 241 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 MAELQ96JY0 434 aaKnown RBP19.9■□□□□ 0.78
CACNB3-210ENST00000548874 PPP1R36Q96LQ0 422 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 DPH1Q9BZG8 443 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 C14orf105Q9NVL8 296 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 PHF11Q9UIL8 331 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 FARSAQ9Y285 508 aaKnown RBP19.9■□□□□ 0.78
CACNB3-210ENST00000548874 TMED5Q9Y3A6 229 aa19.9■□□□□ 0.78
CACNB3-210ENST00000548874 CYR61O00622 381 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 PEX11AO75192 247 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 VPS4BO75351 444 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 TGDSO95455 350 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 ZGLP1P0C6A0 271 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 MAPK12P53778 367 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 TRA2BP62995 288 aaKnown RBP19.89■□□□□ 0.77
CACNB3-210ENST00000548874 RPL38P63173 70 aaKnown RBP19.89■□□□□ 0.77
CACNB3-210ENST00000548874 SMU1Q2TAY7 513 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 GALNTL6Q49A17 601 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 VWA5B1Q5TIE3 1220 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 NOXRED1Q6NXP6 359 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 LARP4Q71RC2 724 aaKnown RBP eCLIP19.89■□□□□ 0.77
CACNB3-210ENST00000548874 GPR180Q86V85 440 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 MIEF2Q96C03 454 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 YIPF2Q9BWQ6 316 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 AKTIPQ9H8T0 292 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 LANCL2Q9NS86 450 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 MS4A12Q9NXJ0 267 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 SSUH2Q9Y2M2 353 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 ATG4BQ9Y4P1 393 aa19.89■□□□□ 0.77
CACNB3-210ENST00000548874 POLR3HQ9Y535 204 aaPredicted RBP19.89■□□□□ 0.77
CACNB3-210ENST00000548874 ARHGAP10A1A4S6 786 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 PROM1O43490 865 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 JRKO75564 520 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 FHP07954 510 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 LIFP15018 202 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 ACPPP15309 386 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 PTPN4P29074 926 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 EIF2S3P41091 472 aaKnown RBP19.88■□□□□ 0.77
CACNB3-210ENST00000548874 FOXL2P58012 376 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 RPS15P62841 145 aaKnown RBP19.88■□□□□ 0.77
CACNB3-210ENST00000548874 FOXK2Q01167 660 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 TUBB8Q3ZCM7 444 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 SLC9B1Q4ZJI4 515 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 EPGNQ6UW88 154 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 TMEM151BQ8IW70 566 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 OR2Y1Q8NGV0 311 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 KIAA1143Q96AT1 154 aaPredicted RBP19.88■□□□□ 0.77
CACNB3-210ENST00000548874 TM4SF18Q96CE8 201 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 NAF1Q96HR8 494 aaKnown RBP19.88■□□□□ 0.77
CACNB3-210ENST00000548874 CSF3RQ99062 836 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 WDR55Q9H6Y2 383 aaPredicted RBP19.88■□□□□ 0.77
CACNB3-210ENST00000548874 GPN2Q9H9Y4 310 aaPredicted RBP19.88■□□□□ 0.77
CACNB3-210ENST00000548874 FGFR1OP2Q9NVK5 253 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 IL17BQ9UHF5 180 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 KCND3Q9UK17 655 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 FBXW2Q9UKT8 454 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 TCFL5Q9UL49 500 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 DLGAP4Q9Y2H0 992 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 PADI2Q9Y2J8 665 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 APC2O95996 2303 aa19.88■□□□□ 0.77
CACNB3-210ENST00000548874 A0A1W2PR48 441 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 TMEM8BA6NDV4 472 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 FAM227AF5H4B4 570 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 PSMD12O00232 456 aaPredicted RBP19.87■□□□□ 0.77
CACNB3-210ENST00000548874 POLR3GO15318 223 aaPredicted RBP19.87■□□□□ 0.77
CACNB3-210ENST00000548874 MYO1DO94832 1006 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 VIMP08670 466 aaKnown RBP19.87■□□□□ 0.77
CACNB3-210ENST00000548874 ANXA4P09525 319 aaPredicted RBP19.87■□□□□ 0.77
CACNB3-210ENST00000548874 EPHA3P29320 983 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 GSTM5P46439 218 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 TNFRSF17Q02223 184 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 KLC1Q07866 573 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 OGFOD2Q6N063 350 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 VASH2Q86V25 355 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 EFCAB3Q8N7B9 438 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.87■□□□□ 0.77
CACNB3-210ENST00000548874 EFHD1Q9BUP0 239 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 EBPLQ9BY08 206 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 RBCK1Q9BYM8 510 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 ACTL8Q9H568 366 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 TEX10Q9NXF1 929 aaPredicted RBP19.87■□□□□ 0.77
CACNB3-210ENST00000548874 ASIC5Q9NY37 505 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 SPACA6W5XKT8 324 aa19.87■□□□□ 0.77
CACNB3-210ENST00000548874 NUP210LQ5VU65 1888 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 GNG14A0A1W2PPG7 69 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 UMODP07911 640 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 LBPP18428 481 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 SDC1P18827 310 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 CPN2P22792 545 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 JAK1P23458 1154 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 LSP1P33241 339 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 HNRNPFP52597 415 aaKnown RBP19.86■□□□□ 0.77
CACNB3-210ENST00000548874 EFNA3P52797 238 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 RPS18P62269 152 aaKnown RBP19.86■□□□□ 0.77
CACNB3-210ENST00000548874 EMX2Q04743 252 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms