RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 AP5B1Q2VPB7 878 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 TMEM35AQ53FP2 167 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 TTC19Q6DKK2 380 aaPredicted RBP14.79□□□□□ -0.04
DDX54-205ENST00000548786 ATCAYQ86WG3 371 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 TMEM151AQ8N4L1 468 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 ACOT4Q8N9L9 421 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 EIF1ADQ8N9N8 165 aaKnown RBP14.79□□□□□ -0.04
DDX54-205ENST00000548786 OR1N1Q8NGS0 311 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 OR2W6PQ8NHA6 318 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 MZB1Q8WU39 189 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 SNRNP40Q96DI7 357 aaKnown RBP14.79□□□□□ -0.04
DDX54-205ENST00000548786 TBCDQ9BTW9 1192 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.79□□□□□ -0.04
DDX54-205ENST00000548786 CLK4Q9HAZ1 481 aaKnown RBP14.79□□□□□ -0.04
DDX54-205ENST00000548786 ASF1BQ9NVP2 202 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 ANKRD10Q9NXR5 420 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 DAPP1Q9UN19 280 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 NTNG1Q9Y2I2 539 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 PCDHGA11Q9Y5H2 935 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 PCDHGA10Q9Y5H3 936 aa14.79□□□□□ -0.04
DDX54-205ENST00000548786 H0YIV9 168 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 CYR61O00622 381 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 CLDN4O14493 209 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 PLPP1O14494 284 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 ZNF500O60304 480 aaPredicted RBP14.78□□□□□ -0.04
DDX54-205ENST00000548786 VPS4BO75351 444 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 PRKRAO75569 313 aaKnown RBP14.78□□□□□ -0.04
DDX54-205ENST00000548786 ETHE1O95571 254 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 RPS17P08708 135 aaKnown RBP14.78□□□□□ -0.04
DDX54-205ENST00000548786 KRT15P19012 456 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 TAC1P20366 129 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 HIST1H1TP22492 207 aaPredicted RBP14.78□□□□□ -0.04
DDX54-205ENST00000548786 HSD17B3P37058 310 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 PIK3CBP42338 1070 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 AP2B1P63010 937 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 PHEXP78562 749 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 TRAF3Q13114 568 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 DEPDC1Q5TB30 811 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 OR4C11Q6IEV9 310 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 CRLF3Q8IUI8 442 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 SCUBE1Q8IWY4 988 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 BEST3Q8N1M1 668 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 L3MBTL4Q8NA19 623 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 SRFBP1Q8NEF9 429 aaKnown RBP14.78□□□□□ -0.04
DDX54-205ENST00000548786 OR4F6Q8NGB9 312 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 M1APQ8TC57 530 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 TRPC4APQ8TEL6 797 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 ZNF483Q8TF39 744 aaPredicted RBP14.78□□□□□ -0.04
DDX54-205ENST00000548786 RGMAQ96B86 450 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 REPS1Q96D71 796 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 LMF1Q96S06 567 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 ROGDIQ9GZN7 287 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 STMN3Q9NZ72 180 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 FETUBQ9UGM5 382 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 VPS4AQ9UN37 437 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 MRPS33Q9Y291 106 aaKnown RBP14.78□□□□□ -0.04
DDX54-205ENST00000548786 MMACHCQ9Y4U1 282 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 RP1L1Q8IWN7 2480 aaPredicted RBP14.78□□□□□ -0.04
DDX54-205ENST00000548786 CPAMD8Q8IZJ3 1885 aa14.78□□□□□ -0.04
DDX54-205ENST00000548786 TLDC2A0PJX2 215 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 SAGE2PA6NJ88 616 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 ESPNB1AK53 854 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 DLX3O60479 287 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 UGDHO60701 494 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 LDB3O75112 727 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 EEDO75530 441 aaKnown RBP14.77□□□□□ -0.05
DDX54-205ENST00000548786 SLU7O95391 586 aaKnown RBP14.77□□□□□ -0.05
DDX54-205ENST00000548786 GBAP04062 536 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 IFNA16P05015 189 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 CPN2P22792 545 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 SRSF11Q05519 484 aaKnown RBP14.77□□□□□ -0.05
DDX54-205ENST00000548786 SLAMF1Q13291 335 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 MRPL49Q13405 166 aaKnown RBP14.77□□□□□ -0.05
DDX54-205ENST00000548786 TLR1Q15399 786 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 ACER2Q5QJU3 275 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 MILR1Q7Z6M3 343 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 WDR20Q8TBZ3 569 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 ADAMTS18Q8TE60 1221 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 THAP3Q8WTV1 239 aaPredicted RBP14.77□□□□□ -0.05
DDX54-205ENST00000548786 TMEM237Q96Q45 408 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 NPAS2Q99743 824 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 CENPKQ9BS16 269 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 C12orf65Q9H3J6 166 aaKnown RBP14.77□□□□□ -0.05
DDX54-205ENST00000548786 MMP25Q9NPA2 562 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 FARSBQ9NSD9 589 aaKnown RBP14.77□□□□□ -0.05
DDX54-205ENST00000548786 KCMF1Q9P0J7 381 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 ADGRE2Q9UHX3 823 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 TEKT2Q9UIF3 430 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 COPG1Q9Y678 874 aaKnown RBP14.77□□□□□ -0.05
DDX54-205ENST00000548786 SHANK1Q9Y566 2161 aa14.77□□□□□ -0.05
DDX54-205ENST00000548786 ARHGAP10A1A4S6 786 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 TCP11X1B4DZS4 312 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 SUPT7LO94864 414 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 PTX3P26022 381 aaPredicted RBP14.76□□□□□ -0.05
DDX54-205ENST00000548786 TNFSF10P50591 281 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 HSD17B7P56937 341 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 TAS2R50P59544 299 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 HERVK_113P63132 956 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 IFT88Q13099 833 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 RCN2Q14257 317 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms