RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 A8MUI8 341 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 HNRNPCL3B7ZW38 293 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 H0YC42 278 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 K7EQM0 130 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 LGALS8O00214 317 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 OGTO15294 1046 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 LRP3O75074 770 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 CLN5O75503 358 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 WISP2O76076 250 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 PIGNO95427 931 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 SYNGR4O95473 234 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ASNSP08243 561 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 HNRNPCL4P0DMR1 293 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 EZRP15311 586 aaKnown RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 S1PR1P21453 382 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 TNNT2P45379 298 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 MTIF2P46199 727 aaKnown RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 DHPSP49366 369 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 PCYT1AP49585 367 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 METAP1P53582 386 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 CCNA1P78396 465 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 KIF5AQ12840 1032 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 TRAP1Q12931 704 aaKnown RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 MFAP5Q13361 173 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 KCTD21Q4G0X4 260 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 XKR9Q5GH70 373 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 EFHC1Q5JVL4 640 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 FNBP1LQ5T0N5 605 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ARHGAP11AQ6P4F7 1023 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ZYG11AQ6WRX3 759 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 TAS2R42Q7RTR8 314 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ANKRD33Q7Z3H0 272 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 LONP2Q86WA8 852 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF679Q8IYX0 411 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 TDHQ8IZJ6 230 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 CRYBG2Q8N1P7 616 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 PRSS35Q8N3Z0 413 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 EIF1ADQ8N9N8 165 aaKnown RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 MINDY2Q8NBR6 621 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 RNF149Q8NC42 400 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 STEAP2Q8NFT2 490 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 FGFBP3Q8TAT2 258 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 GLYATL1Q969I3 302 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 SGK494Q96LW2 274 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF607Q96SK3 696 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 CSF3RQ99062 836 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 PLIN2Q99541 437 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 NEURL2Q9BR09 285 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ALKBH7Q9BT30 221 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 NTMT1Q9BV86 223 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 GCOM2Q9BZD3 368 aaPredicted RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ARRDC1-AS1Q9H2J1 176 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 DPEP2Q9H4A9 486 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 TRPC7Q9HCX4 862 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 CHST11Q9NPF2 352 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 RBM28Q9NW13 759 aaKnown RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ATXN10Q9UBB4 475 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 MALT1Q9UDY8 824 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 NCKAP1Q9Y2A7 1128 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 MRPS2Q9Y399 296 aaKnown RBP3.89□□□□□ -1.79
SCAF11-210ENST00000547654 NAALAD2Q9Y3Q0 740 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 PCDHAC2Q9Y5I4 1007 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 ADGBQ8N7X0 1667 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 CHD4Q14839 1912 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 PHLPP1O60346 1717 aa3.89□□□□□ -1.79
SCAF11-210ENST00000547654 COL16A1Q07092 1604 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 SHPRHQ149N8 1683 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CAMTA1Q9Y6Y1 1673 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 OR6C75A6NL08 312 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 E9PI62 339 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CASQ2O14958 399 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 XPO1O14980 1071 aaKnown RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 ZNHIT1O43257 154 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CSO75390 466 aaKnown RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 KIAA0754O94854 1291 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 HMBSP08397 361 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 ANPEPP15144 967 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 MYOD1P15172 320 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CYP3A5P20815 502 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CDH3P22223 829 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 PRDX2P32119 198 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 USP8P40818 1118 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 MAGEA11P43364 429 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 TNFRSF4P43489 277 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 NKX2-1P43699 371 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 AMTP48728 403 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CCL11P51671 97 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 SH3BGRP55822 239 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CLDN17P56750 224 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 ISL1P61371 349 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 BNC1Q01954 994 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 COX10Q12887 443 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CDH18Q13634 790 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 BTG3Q14201 252 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CALCRLQ16602 461 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 DUOXA1Q1HG43 343 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 SHROOM1Q2M3G4 852 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 CCDC57Q2TAC2 916 aa3.88□□□□□ -1.79
SCAF11-210ENST00000547654 ZC2HC1CQ53FD0 456 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-210ENST00000547654 PHLDA2Q53GA4 152 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms