RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TNMDQ9H2S6 317 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF556Q9HAH1 456 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 ANO10Q9NW15 660 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 FAM118AQ9NWS6 357 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 COMMD8Q9NX08 183 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 IL19Q9UHD0 177 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 SLC12A6Q9UHW9 1150 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 MAD2L2Q9UI95 211 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 ISY1Q9ULR0 285 aaKnown RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 NCKAP1Q9Y2A7 1128 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 TDRKHQ9Y2W6 561 aaKnown RBP3.32□□□□□ -1.88
SCFD1-207ENST00000544052 PFASO15067 1338 aa3.32□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF646O15015 1829 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-207ENST00000544052 TRBV4-1A0A0J9YWV2 114 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 KRT87PA6NCN2 255 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 MLNRO43193 412 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 KIF5CO60282 957 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 GLRA3O75311 464 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 CDK2AP2O75956 126 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 REC8O95072 547 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 CXCL14O95715 111 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 ABHD2P08910 425 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 NUDT17P0C025 328 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 CPA3P15088 417 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 PAX1P15863 534 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 TYMPP19971 482 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 NR0B1P51843 470 aaKnown RBP3.31□□□□□ -1.88
SCFD1-207ENST00000544052 STARD6P59095 220 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 GALK2Q01415 458 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 CDH18Q13634 790 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 ACKR1Q16570 336 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF718Q3SXZ3 478 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF672Q499Z4 452 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-207ENST00000544052 WBP2NLQ6ICG8 309 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 C19orf48Q6RUI8 117 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 ZNF410Q86VK4 478 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 SLC37A3Q8NCC5 494 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 URGCPQ8TCY9 931 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 HPSE2Q8WWQ2 592 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 DTD2Q96FN9 168 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 PSORS1C1Q9UIG5 152 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 RPH3AQ9Y2J0 694 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-207ENST00000544052 STRAPQ9Y3F4 350 aaKnown RBP3.31□□□□□ -1.88
SCFD1-207ENST00000544052 COLEC10Q9Y6Z7 277 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 IL16Q14005 1332 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 FAM149AA5PLN7 773 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 TLR4O00206 839 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 P2RY10O00398 339 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 EPHB6O15197 1021 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 SEC22BO75396 215 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 F7P08709 466 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-207ENST00000544052 CD48P09326 243 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 B4GALT1P15291 398 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 GJB2P29033 226 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 RFC4P35249 363 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 RABIFP47224 123 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 HERV-K104P61576 105 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 WASHC5Q12768 1159 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 PDK1Q15118 436 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 C1orf186Q6ZWK4 172 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 G2E3Q7L622 706 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 PRSS35Q8N3Z0 413 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 OR52E1Q8NGJ3 308 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 OR2T11Q8NH01 316 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 RUFY1Q96T51 708 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 SPXQ9BT56 116 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 MTMR12Q9C0I1 747 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 EGLN3Q9H6Z9 239 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 MAGEF1Q9HAY2 307 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 PRMT8Q9NR22 394 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-207ENST00000544052 NINJ2Q9NZG7 142 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 FLRT3Q9NZU0 649 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 C19orf25Q9UFG5 118 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-207ENST00000544052 PILRBQ9UKJ0 227 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 KCNJ14Q9UNX9 436 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 SCN4AP35499 1836 aa3.31□□□□□ -1.88
SCFD1-207ENST00000544052 LRRC37AA6NMS7 1700 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 SCO2O43819 266 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 EXTL3O43909 919 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 LMX1BO60663 402 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 STAM2O75886 525 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 LETM1O95202 739 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-207ENST00000544052 NADKO95544 446 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-207ENST00000544052 SLC4A1P02730 911 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 MT-ND2P03891 347 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 CHRNGP07510 517 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 ITGA3P26006 1051 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 CCKARP32238 428 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 LUMP51884 338 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-207ENST00000544052 MYL7Q01449 175 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 SP3Q02447 781 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 ACCSLQ4AC99 568 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 ARMCX4Q5H9R4 360 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 ARHGEF16Q5VV41 709 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 DHRS11Q6UWP2 260 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 C17orf107Q6ZR85 190 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 SLC24A5Q71RS6 500 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 BTN2A1Q7KYR7 527 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 THEM5Q8N1Q8 247 aa3.3□□□□□ -1.88
SCFD1-207ENST00000544052 OR1L3Q8NH93 324 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms