RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 FAM227AF5H4B4 570 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 EEDO75530 441 aaKnown RBP16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 LYPLA1O75608 230 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 CHEK2O96017 543 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 HEXBP07686 556 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 HMGCS1Q01581 520 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 BST1Q10588 318 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 SLAMF1Q13291 335 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 UGT3A2Q3SY77 523 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 MINDY4Q4G0A6 757 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 MFSD4BQ5TF39 518 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 PAGE2Q7Z2X7 111 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 GPR155Q7Z3F1 870 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 PPP1R32Q7Z5V6 425 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 RAB3IL1Q8TBN0 382 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 CHTF18Q8WVB6 975 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 CATSPER2Q96P56 530 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 IP6K3Q96PC2 410 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 MAPKAP1Q9BPZ7 522 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 C20orf27Q9GZN8 174 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 ZNF395Q9H8N7 513 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 ADAM29Q9UKF5 820 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 POLHQ9Y253 713 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 FIS1Q9Y3D6 152 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 DNAJC15Q9Y5T4 150 aa16.13■□□□□ 0.17
RABGGTA-203ENST00000543002 ZFHX4Q86UP3 3567 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 TMEM233B4DJY2 109 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 CYR61O00622 381 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 PCDH17O14917 1159 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 B4GALT2O60909 372 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 EFNA3P52797 238 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 ATG16L1Q676U5 607 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 MRM1Q6IN84 353 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 COMMD6Q7Z4G1 85 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 MRGPREQ86SM8 312 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 PLPP5Q8NEB5 264 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 AGR3Q8TD06 166 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 SORT1Q99523 831 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 ILKAPQ9H0C8 392 aaPredicted RBP16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 TUBB1Q9H4B7 451 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 LYARQ9NX58 379 aaKnown RBP16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 MS4A12Q9NXJ0 267 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 PHF11Q9UIL8 331 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 HAO1Q9UJM8 370 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 FBXW2Q9UKT8 454 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 RAP2CQ9Y3L5 183 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 HS3ST3B1Q9Y662 390 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 SPACA6W5XKT8 324 aa16.12■□□□□ 0.17
RABGGTA-203ENST00000543002 OR2W5A6NFC9 320 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 SLC28A1O00337 649 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 SOCS6O14544 535 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 TMPRSS11DO60235 418 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 ALOX12BO75342 701 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 CDC123O75794 336 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 KLK1P06870 262 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 FAM58BPP0C7Q3 252 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 TPP2P29144 1249 aaPredicted RBP16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 RHAGQ02094 409 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 IMPG1Q17R60 797 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 CYP20A1Q6UW02 462 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 TMEM205Q6UW68 189 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 GPR180Q86V85 440 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 KIRREL3Q8IZU9 778 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 C1orf52Q8N6N3 182 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 FAM47BQ8NA70 645 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 TWIST2Q8WVJ9 160 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 CSF3RQ99062 836 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 MANSC1Q9H8J5 431 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 THAP1Q9NVV9 213 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 MRPS33Q9Y291 106 aaKnown RBP16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 MMACHCQ9Y4U1 282 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 CCL27Q9Y4X3 112 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 ASB4Q9Y574 426 aa16.11■□□□□ 0.17
RABGGTA-203ENST00000543002 ARHGAP10A1A4S6 786 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 NPIPB8E9PQR5 432 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 PEX12O00623 359 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 DYNC1I1O14576 645 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 PRMT3O60678 531 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 SNNO75324 88 aaPredicted RBP16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 RSL1D1O76021 490 aaKnown RBP16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 GBAP04062 536 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 C8orf89P0DMQ9 161 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 NR1D1P20393 614 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 CPN2P22792 545 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 HNRNPH2P55795 449 aaKnown RBP16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 ACSM2AQ08AH3 577 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 ATP1A4Q13733 1029 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 DEFB109BQ30KR1 87 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 SPIN4Q56A73 249 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 HSP90B2PQ58FF3 399 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 SPDYAQ5MJ70 313 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 CCNYL2Q5T2Q4 361 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 ACSM2BQ68CK6 577 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 FAAH2Q6GMR7 532 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 KIRREL2Q6UWL6 708 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 QSOX2Q6ZRP7 698 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 ZNF595Q8IYB9 648 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 EFCAB3Q8N7B9 438 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 ZNF781Q8N8C0 355 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms