RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 CLCA3PQ9Y6N3 262 aa8.43□□□□□ -1.06
LMO3-222ENST00000540445 SPACA6W5XKT8 324 aa8.43□□□□□ -1.06
LMO3-222ENST00000540445 NOTCH2Q04721 2471 aa8.43□□□□□ -1.06
LMO3-222ENST00000540445 FREM3P0C091 2139 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 A0A096LPK6 155 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 IGKV3D-11A0A0A0MRZ8 115 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 TRBV11-1A0A0K0K1C0 115 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 MYOCOSA0A1B0GUC4 107 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 NPIPA5E9PKD4 350 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 K7EPI3 171 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 SAP18O00422 153 aaKnown RBP8.42□□□□□ -1.06
LMO3-222ENST00000540445 CCL21O00585 134 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ZG16O60844 167 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 CTNSO60931 367 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 KERAO60938 352 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ESRRAP11474 423 aaPredicted RBP8.42□□□□□ -1.06
LMO3-222ENST00000540445 GFAPP14136 432 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 CD22P20273 847 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 CERS1P27544 350 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 DCTP40126 519 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ARL1P40616 181 aaPredicted RBP8.42□□□□□ -1.06
LMO3-222ENST00000540445 HNRNPFP52597 415 aaKnown RBP8.42□□□□□ -1.06
LMO3-222ENST00000540445 MLF1P58340 268 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 IRF9Q00978 393 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 DDX39BQ13838 428 aaKnown RBP8.42□□□□□ -1.06
LMO3-222ENST00000540445 ACAP2Q15057 778 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 TBCCQ15814 346 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 PFKFB4Q16877 469 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 WHAMMP3Q1A5X7 153 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 KRTCAP3Q53RY4 240 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ZNF468Q5VIY5 522 aaPredicted RBP8.42□□□□□ -1.06
LMO3-222ENST00000540445 ZNF787Q6DD87 383 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ABHD17CQ6PCB6 329 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 VN1R5Q7Z5H4 357 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 CCDC91Q7Z6B0 441 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ZNF595Q8IYB9 648 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 LGI4Q8N135 537 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 TMEM132CQ8N3T6 1108 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 TEX9Q8N6V9 391 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 NFAM1Q8NET5 270 aaPredicted RBP8.42□□□□□ -1.06
LMO3-222ENST00000540445 RHEBL1Q8TAI7 183 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ADAMTS18Q8TE60 1221 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 KCTD4Q8WVF5 259 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 WDR34Q96EX3 536 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 VMP1Q96GC9 406 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 QRFPRQ96P65 431 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ATOH8Q96SQ7 321 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 TBCDQ9BTW9 1192 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ALOXE3Q9BYJ1 711 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ROGDIQ9GZN7 287 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 TSPAN10Q9H1Z9 355 aaPredicted RBP8.42□□□□□ -1.06
LMO3-222ENST00000540445 VPS11Q9H270 941 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ZDHHC18Q9NUE0 388 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 NPIPA1Q9UND3 350 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 ASB1Q9Y576 335 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 CACNA1CQ13936 2221 aa8.42□□□□□ -1.06
LMO3-222ENST00000540445 KLRC4-KLRK1H3BQV0 150 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 RTCAO00442 366 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 CYR61O00622 381 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 CDK2AP1O14519 115 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 LDB3O75112 727 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ITGA10O75578 1167 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 SLC25A12O75746 678 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 NEURL1O76050 574 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 WISP2O76076 250 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ZFAND5O76080 213 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 KLHL2O95198 593 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ACSL3O95573 720 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 TBX6O95947 436 aaPredicted RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 EPORP19235 508 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 CPN2P22792 545 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ATP5A1P25705 553 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 PPP2R1BP30154 601 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 CASP2P42575 452 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 SSR2P43308 183 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 HLCSP50747 726 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 RAP1GDS1P52306 607 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ZRSR2Q15696 482 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.41□□□□□ -1.06
LMO3-222ENST00000540445 ADPRMQ3LIE5 342 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 TMEM35AQ53FP2 167 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 SCUBE1Q8IWY4 988 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 MMGT1Q8N4V1 131 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ACOT4Q8N9L9 421 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 APCDD1LQ8NCL9 501 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 TMEM52Q8NDY8 209 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 MNS1Q8NEH6 495 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 OR7G3Q8NG95 312 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ZNF473Q8WTR7 871 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 SREK1Q8WXA9 508 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 DAZLQ92904 295 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 NCLNQ969V3 563 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 RELTQ969Z4 430 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ATP6V1E2Q96A05 226 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 RGMAQ96B86 450 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 CMTM7Q96FZ5 175 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 SCMH1Q96GD3 660 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 SCYL1Q96KG9 808 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 CSF3RQ99062 836 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms