RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 COQ8BQ96D53 544 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 RMND5AQ9H871 391 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 IL1RL2Q9HB29 575 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 FGF21Q9NSA1 209 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 GID8Q9NWU2 228 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 PHF11Q9UIL8 331 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 SERTAD3Q9UJW9 196 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 ATG4BQ9Y4P1 393 aa15.31■□□□□ 0.04
TRAF3-204ENST00000539721 AGRPO00253 132 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 DNAJC8O75937 253 aaPredicted RBP15.3■□□□□ 0.04
TRAF3-204ENST00000539721 DRD2P14416 443 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 ITGA1P56199 1179 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 SKP1P63208 163 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 OLR1P78380 273 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 PLIN5Q00G26 463 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 ACTN3Q08043 901 aaPredicted RBP15.3■□□□□ 0.04
TRAF3-204ENST00000539721 DMTNQ08495 405 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 TRA2AQ13595 282 aaKnown RBP eCLIP15.3■□□□□ 0.04
TRAF3-204ENST00000539721 RUNX2Q13950 521 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 ZNF385BQ569K4 471 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 HACD2Q6Y1H2 254 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 DEFB107AQ8IZN7 70 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 DPP10Q8N608 796 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 OR9A4Q8NGU2 314 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 ZNF501Q96CX3 271 aaPredicted RBP15.3■□□□□ 0.04
TRAF3-204ENST00000539721 BHLHE41Q9C0J9 482 aaPredicted RBP15.3■□□□□ 0.04
TRAF3-204ENST00000539721 WDR41Q9HAD4 459 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 FAM120CQ9NX05 1096 aaKnown RBP15.3■□□□□ 0.04
TRAF3-204ENST00000539721 CROTQ9UKG9 612 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 CROCCQ5TZA2 2017 aa15.3■□□□□ 0.04
TRAF3-204ENST00000539721 A0A0A6YYC8 382 aaPredicted RBP15.29■□□□□ 0.04
TRAF3-204ENST00000539721 A0A1W2PR48 441 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 H3BMH7 237 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 I3L1I5 382 aaPredicted RBP15.29■□□□□ 0.04
TRAF3-204ENST00000539721 SGK494L7N484 410 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 GSC2O15499 205 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 MED26O95402 600 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 AIFM1O95831 613 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 DDX5P17844 614 aaKnown RBP15.29■□□□□ 0.04
TRAF3-204ENST00000539721 CPN2P22792 545 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 EMP3P54852 163 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 LIM2P55344 173 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 FAM53BQ14153 422 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 MUM1Q2TAK8 710 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 FAM214AQ32MH5 1076 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 TRMT5Q32P41 509 aaKnown RBP15.29■□□□□ 0.04
TRAF3-204ENST00000539721 C6orf10Q5SRN2 563 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 STPG1Q5TH74 334 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 ANXA8L1Q5VT79 327 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 NIPAL1Q6NVV3 410 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 DHDDSQ86SQ9 333 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 ANKRD46Q86W74 232 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 PGAM4Q8N0Y7 254 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 GTF2H4Q92759 462 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 MCUR1Q96AQ8 359 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 ITCHQ96J02 903 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 CADM1Q9BY67 442 aaKnown RBP15.29■□□□□ 0.04
TRAF3-204ENST00000539721 DAPP1Q9UN19 280 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 PCDHA9Q9Y5H5 950 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 SPTBP11277 2137 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 C1orf226A1L170 272 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 PROM1O43490 865 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 TBX19O60806 448 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 RDH16O75452 317 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 PRKRAO75569 313 aaKnown RBP15.29■□□□□ 0.04
TRAF3-204ENST00000539721 RFPL3O75679 317 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 KCNH1O95259 989 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 NR2F6P10588 404 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 BUD31P41223 144 aaPredicted RBP15.29■□□□□ 0.04
TRAF3-204ENST00000539721 WNT3P56703 355 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 PSME3P61289 254 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 KCNJ2P63252 427 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 C18orf63Q68DL7 685 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 TLDC1Q6P9B6 456 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 B3GNT8Q7Z7M8 397 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 DTWD1Q8N5C7 304 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 VPS37AQ8NEZ2 397 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 UCN3Q969E3 161 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 LRRC58Q96CX6 371 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 NPLQ9BXD5 320 aaPredicted RBP15.29■□□□□ 0.04
TRAF3-204ENST00000539721 LYRM4Q9HD34 91 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 ENAMQ9NRM1 1142 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 CUTCQ9NTM9 273 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 C5AR2Q9P296 337 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 SPACA6W5XKT8 324 aa15.29■□□□□ 0.04
TRAF3-204ENST00000539721 COL27A1Q8IZC6 1860 aaPredicted RBP15.28■□□□□ 0.04
TRAF3-204ENST00000539721 MUC6Q6W4X9 2439 aa15.28■□□□□ 0.04
TRAF3-204ENST00000539721 FOXS1O43638 330 aa15.28■□□□□ 0.04
TRAF3-204ENST00000539721 DNAJB6O75190 326 aa15.28■□□□□ 0.04
TRAF3-204ENST00000539721 NSA2O95478 260 aaKnown RBP15.28■□□□□ 0.04
TRAF3-204ENST00000539721 EFNA1P20827 205 aaPredicted RBP15.28■□□□□ 0.04
TRAF3-204ENST00000539721 CSTF2P33240 577 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRAF3-204ENST00000539721 PGM1P36871 562 aa15.28■□□□□ 0.04
TRAF3-204ENST00000539721 AVPR1BP47901 424 aa15.28■□□□□ 0.04
TRAF3-204ENST00000539721 TNFRSF17Q02223 184 aa15.28■□□□□ 0.04
TRAF3-204ENST00000539721 ZFP36L1Q07352 338 aaKnown RBP15.28■□□□□ 0.04
TRAF3-204ENST00000539721 FOXM1Q08050 763 aa15.28■□□□□ 0.04
TRAF3-204ENST00000539721 ILKQ13418 452 aa15.28■□□□□ 0.04
TRAF3-204ENST00000539721 CAPRIN1Q14444 709 aaKnown RBP15.28■□□□□ 0.04
TRAF3-204ENST00000539721 PRSS53Q2L4Q9 553 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms