RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 NEUROD4Q9HD90 331 aa17.08■□□□□ 0.32
GNE-204ENST00000539208 LHX9Q9NQ69 397 aa17.08■□□□□ 0.32
GNE-204ENST00000539208 SERGEFQ9UGK8 458 aa17.08■□□□□ 0.32
GNE-204ENST00000539208 POFUT2Q9Y2G5 429 aa17.08■□□□□ 0.32
GNE-204ENST00000539208 TRPM6Q9BX84 2022 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 PDPK1O15530 556 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 RGS10O43665 173 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 PCDHGA12O60330 932 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 KCNJ13O60928 360 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 BCAS1O75363 584 aaPredicted RBP17.07■□□□□ 0.32
GNE-204ENST00000539208 WBP4O75554 376 aaKnown RBP17.07■□□□□ 0.32
GNE-204ENST00000539208 XCR1P46094 333 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 OR1E2P47887 323 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 PCBP4P57723 403 aaKnown RBP17.07■□□□□ 0.32
GNE-204ENST00000539208 TRA2BP62995 288 aaKnown RBP17.07■□□□□ 0.32
GNE-204ENST00000539208 CYP4F2P78329 520 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 BNIP3Q12983 259 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 ZNF829Q3KNS6 432 aaPredicted RBP17.07■□□□□ 0.32
GNE-204ENST00000539208 SYT6Q5T7P8 510 aaPredicted RBP17.07■□□□□ 0.32
GNE-204ENST00000539208 MLIPQ5VWP3 458 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 REEP3Q6NUK4 255 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 PRSS48Q7RTY5 328 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 NUDT13Q86X67 352 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 ENTHD1Q8IYW4 607 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 SLC5A8Q8N695 610 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 ZNF540Q8NDQ6 660 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 SIGLEC11Q96RL6 698 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 INSM2Q96T92 566 aaPredicted RBP17.07■□□□□ 0.32
GNE-204ENST00000539208 PIP5K1AQ99755 562 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 C1QTNF2Q9BXJ5 285 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 RMI1Q9H9A7 625 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 A4GALTQ9NPC4 353 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 ETAA1Q9NY74 926 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 AASSQ9UDR5 926 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 ZFR2Q9UPR6 939 aaKnown RBP17.07■□□□□ 0.32
GNE-204ENST00000539208 WDR37Q9Y2I8 494 aa17.07■□□□□ 0.32
GNE-204ENST00000539208 FEZF1A0PJY2 475 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 RTCAO00442 366 aaKnown RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 TNFRSF1BP20333 461 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 PSMB5P28074 263 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 GGT2P36268 569 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 WASP42768 502 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 LIMS1P48059 325 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 MAPK10P53779 464 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 MANFP55145 182 aaKnown RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 CSNK1G2P78368 415 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 SPIBQ01892 262 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 FGL2Q14314 439 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 CTF1Q16619 201 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 APH1BQ8WW43 257 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 FERD3LQ96RJ6 166 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 TMEM121BQ9BXQ6 578 aaPredicted RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 DDX31Q9H8H2 851 aaKnown RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 CERS4Q9HA82 394 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 SLAMF7Q9NQ25 335 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 PLCXD1Q9NUJ7 323 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 ENPP4Q9Y6X5 453 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 CKAP5Q14008 2032 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 PRAMEF33A0A0G2JMD5 474 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 A0A1W2PP55 124 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 NDUFS4O43181 175 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 PRAMEF10O60809 474 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 FAM20BO75063 409 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 CLEC3AO75596 197 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 FUCA1P04066 466 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 KRT20P35900 424 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 CDH12P55289 794 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 RPS21P63220 83 aaKnown RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 PRDX1Q06830 199 aaKnown RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 MLF2Q15773 248 aaPredicted RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 SMN1Q16637 294 aaKnown RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 DUS1LQ6P1R4 473 aaKnown RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 ZNF605Q86T29 641 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 ZNF513Q8N8E2 541 aaPredicted RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 BORCS5Q969J3 196 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 CAMK1GQ96NX5 476 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 RAB11FIP5Q9BXF6 653 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 TAS2R7Q9NYW3 318 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 YBX2Q9Y2T7 364 aaKnown RBP17.06■□□□□ 0.32
GNE-204ENST00000539208 SNX8Q9Y5X2 465 aa17.06■□□□□ 0.32
GNE-204ENST00000539208 SH3PXD2BA1X283 911 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 PRR19A6NJB7 356 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 OR1F1O43749 312 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 GABARAPO95166 117 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 PAK4O96013 591 aaPredicted RBP17.05■□□□□ 0.32
GNE-204ENST00000539208 MT-ND2P03891 347 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 RHCEP18577 417 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 RAB28P51157 221 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 TEKQ02763 1124 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 MLC1Q15049 377 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 EXOC3L2Q2M3D2 409 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 ITPRIPL2Q3MIP1 535 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 ZNF776Q68DI1 518 aaPredicted RBP17.05■□□□□ 0.32
GNE-204ENST00000539208 CEACAM20Q6UY09 585 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 UBE3DQ7Z6J8 389 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 CACUL1Q86Y37 369 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 TTLQ8NG68 377 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 PSMA8Q8TAA3 256 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 ELSPBP1Q96BH3 223 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms