RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 RPS6KA6Q9UK32 745 aa10.9□□□□□ -0.66
SEMA4D-221ENST00000537934 FBXW11Q9UKB1 542 aa10.9□□□□□ -0.66
SEMA4D-221ENST00000537934 NCKAP1Q9Y2A7 1128 aa10.9□□□□□ -0.66
SEMA4D-221ENST00000537934 MRPS7Q9Y2R9 242 aaKnown RBP10.9□□□□□ -0.66
SEMA4D-221ENST00000537934 ALPK3Q96L96 1907 aa10.9□□□□□ -0.67
SEMA4D-221ENST00000537934 XIRP2A4UGR9 3374 aa10.9□□□□□ -0.67
SEMA4D-221ENST00000537934 PATJQ8NI35 1801 aa10.9□□□□□ -0.67
SEMA4D-221ENST00000537934 PTPRSQ13332 1948 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 LINC01387J3KSC0 135 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 VNN2O95498 520 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 MPC2O95563 127 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 ADRA2AP08913 450 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 HSF2Q03933 536 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 GRM7Q14831 915 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 DUSP6Q16828 381 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 ZNF628Q5EBL2 1059 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 MTERF3Q96E29 417 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 ASIC4Q96FT7 647 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 IGSF21Q96ID5 467 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 P2RY13Q9BPV8 354 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 REG4Q9BYZ8 158 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 MED28Q9H204 178 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 NT5DC2Q9H857 520 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 ARNT2Q9HBZ2 717 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 SLC6A13Q9NSD5 602 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 ADAM30Q9UKF2 790 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 MAB21L2Q9Y586 359 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 MRPL42Q9Y6G3 142 aaKnown RBP10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 NUP205Q92621 2012 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 FAM170BA6NMN3 283 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 KRBOX1C9JBD0 128 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 GMDSO60547 372 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 CDRT1O95170 752 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 LDOC1O95751 146 aaPredicted RBP10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 SLC2A4P14672 509 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 PCSK2P16519 638 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 APEX1P27695 318 aaKnown RBP10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 CLCN4P51793 760 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 ERVPABLB-1P60509 514 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 ELAVL2Q12926 359 aaKnown RBP10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 ZNF169Q14929 603 aaPredicted RBP10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 TAF12Q16514 161 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 MICAQ29983 383 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 ZNF284Q2VY69 593 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 SPANXN4Q5MJ08 99 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 PLAG1Q6DJT9 500 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 OVCH2Q7RTZ1 564 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 C1orf52Q8N6N3 182 aaKnown RBP10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 KCNJ15Q99712 375 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 CCM2Q9BSQ5 444 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 SAV1Q9H4B6 383 aaPredicted RBP10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 SLC28A3Q9HAS3 691 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 KCMF1Q9P0J7 381 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 SSR3Q9UNL2 185 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 LIPT1Q9Y234 373 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 PCDHGA2Q9Y5H1 932 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 SESN1Q9Y6P5 492 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 EYSQ5T1H1 3165 aa10.89□□□□□ -0.67
SEMA4D-221ENST00000537934 LOC102723532A0A0G2JNH3 316 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 MTMR11A4FU01 709 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 SH3D21A4FU49 640 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 MFSD2BA6NFX1 497 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 OR6C75A6NL08 312 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 EFEMP2O95967 443 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 HAAOP46952 286 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 HTR6P50406 440 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 MXD1Q05195 221 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 HNRNPA0Q13151 305 aaKnown RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 ELOAQ14241 798 aaKnown RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 PTGR1Q14914 329 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 LGALSLQ3ZCW2 172 aaPredicted RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 LRIF1Q5T3J3 769 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 ZNF648Q5T619 568 aaPredicted RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 ADGRD2Q7Z7M1 963 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 SLC44A2Q8IWA5 706 aaPredicted RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 FAM217AQ8IXS0 508 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 CARNMT1Q8N4J0 409 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 TMEM145Q8NBT3 493 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 VPS37AQ8NEZ2 397 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 OR8K3Q8NH51 312 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 CEP76Q8TAP6 659 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 METTL6Q8TCB7 284 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 BADQ92934 168 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 UCN3Q969E3 161 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 FUBP1Q96AE4 644 aaKnown RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 TBATAQ96M53 351 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 SERPINB11Q96P15 392 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 OR52E6Q96RD3 313 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 SOSTQ9BQB4 213 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 DPY30Q9C005 99 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 PPP1R3EQ9H7J1 279 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 ANKRA2Q9H9E1 313 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 SDHAF2Q9NX18 166 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 CXXC1Q9P0U4 656 aaPredicted RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 BAIAP2Q9UQB8 552 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 PCDHGB3Q9Y5G1 929 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 RNF215Q9Y6U7 377 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 MYO16Q9Y6X6 1858 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 A0A0A6YYJ9 748 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms