RNA–Protein interactions for RNA: ENST00000533998.5

FNTA-214, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-214ENST00000533998 FAM47BQ8NA70 645 aa23.74■■□□□ 1.39
FNTA-214ENST00000533998 NFAM1Q8NET5 270 aaPredicted RBP23.74■■□□□ 1.39
FNTA-214ENST00000533998 REPS1Q96D71 796 aa23.74■■□□□ 1.39
FNTA-214ENST00000533998 NPAS2Q99743 824 aa23.74■■□□□ 1.39
FNTA-214ENST00000533998 EPB41L4BQ9H329 900 aa23.74■■□□□ 1.39
FNTA-214ENST00000533998 OR51B5Q9H339 312 aa23.74■■□□□ 1.39
FNTA-214ENST00000533998 NOL11Q9H8H0 719 aaKnown RBP23.74■■□□□ 1.39
FNTA-214ENST00000533998 CLDN16Q9Y5I7 305 aa23.74■■□□□ 1.39
FNTA-214ENST00000533998 SH3BGRLO75368 114 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 SCELO95171 688 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 CBX6O95503 412 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 MYBL2P10244 700 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 HIST1H1TP22492 207 aaPredicted RBP23.73■■□□□ 1.39
FNTA-214ENST00000533998 PHEXP78562 749 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 SLC13A2Q13183 592 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 DDX39BQ13838 428 aaKnown RBP23.73■■□□□ 1.39
FNTA-214ENST00000533998 NR6A1Q15406 480 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 CPSF6Q16630 551 aaKnown RBP eCLIP23.73■■□□□ 1.39
FNTA-214ENST00000533998 OR4C11Q6IEV9 310 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 SLC5A8Q8N695 610 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 GRHL3Q8TE85 626 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 MTERF1Q99551 399 aaKnown RBP23.73■■□□□ 1.39
FNTA-214ENST00000533998 NTMT1Q9BV86 223 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 DMRT3Q9NQL9 472 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 PCTPQ9UKL6 214 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 RNF11Q9Y3C5 154 aa23.73■■□□□ 1.39
FNTA-214ENST00000533998 IQANK1A0A1B0GTG1 560 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 SYNDIG1LA6NDD5 238 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 A8MUA0 341 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 RTCAO00442 366 aaKnown RBP23.72■■□□□ 1.39
FNTA-214ENST00000533998 OR7A17O14581 309 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 CTNSO60931 367 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 CLDN9O95484 217 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 SBK3P0C264 359 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 PTX3P26022 381 aaPredicted RBP23.72■■□□□ 1.39
FNTA-214ENST00000533998 ARFIP1P53367 373 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 MRPL49Q13405 166 aaKnown RBP23.72■■□□□ 1.39
FNTA-214ENST00000533998 TERF2Q15554 542 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 GSPT2Q8IYD1 628 aaKnown RBP23.72■■□□□ 1.39
FNTA-214ENST00000533998 LGI4Q8N135 537 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 BEST3Q8N1M1 668 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 RNF175Q8N4F7 328 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 FAR1Q8WVX9 515 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 ATP6V1E2Q96A05 226 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 RGMAQ96B86 450 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 CSF3RQ99062 836 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 MAPKAP1Q9BPZ7 522 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 CCDC77Q9BR77 488 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 CENPKQ9BS16 269 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 PSD3Q9NYI0 1048 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 ABI3Q9P2A4 366 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 FLNCQ14315 2725 aa23.72■■□□□ 1.39
FNTA-214ENST00000533998 TGFBR3LH3BV60 316 aa23.71■■□□□ 1.39
FNTA-214ENST00000533998 SAP18O00422 153 aaKnown RBP23.71■■□□□ 1.39
FNTA-214ENST00000533998 SSR2P43308 183 aa23.71■■□□□ 1.39
FNTA-214ENST00000533998 INAQ16352 499 aa23.71■■□□□ 1.39
FNTA-214ENST00000533998 TEX35Q5T0J7 233 aa23.71■■□□□ 1.39
FNTA-214ENST00000533998 LCA5Q86VQ0 697 aa23.71■■□□□ 1.39
FNTA-214ENST00000533998 KIF2BQ8N4N8 673 aa23.71■■□□□ 1.39
FNTA-214ENST00000533998 SUN3Q8TAQ9 357 aa23.71■■□□□ 1.39
FNTA-214ENST00000533998 WDR20Q8TBZ3 569 aa23.71■■□□□ 1.39
FNTA-214ENST00000533998 ZBTB26Q9HCK0 441 aa23.71■■□□□ 1.39
FNTA-214ENST00000533998 PNO1Q9NRX1 252 aaKnown RBP23.71■■□□□ 1.39
FNTA-214ENST00000533998 PSMC3IPQ9P2W1 217 aaPredicted RBP23.71■■□□□ 1.39
FNTA-214ENST00000533998 PPIEQ9UNP9 301 aaKnown RBP23.71■■□□□ 1.39
FNTA-214ENST00000533998 BLACEA4D250 179 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 FOXE1O00358 373 aaPredicted RBP23.7■■□□□ 1.38
FNTA-214ENST00000533998 CDK2AP1O14519 115 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 MAN1A2O60476 641 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 CCNG1P51959 295 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 RAP1GDS1P52306 607 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 RPS13P62277 151 aaKnown RBP23.7■■□□□ 1.38
FNTA-214ENST00000533998 ZRSR2Q15696 482 aaKnown RBP23.7■■□□□ 1.38
FNTA-214ENST00000533998 EIF2S3LQ2VIR3 472 aaKnown RBP23.7■■□□□ 1.38
FNTA-214ENST00000533998 FHL5Q5TD97 284 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 FAM180AQ6UWF9 173 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 CLNKQ7Z7G1 428 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 RPS19BP1Q86WX3 136 aaKnown RBP23.7■■□□□ 1.38
FNTA-214ENST00000533998 APCDD1LQ8NCL9 501 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 B3GNT7Q8NFL0 401 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 OR52B6Q8NGF0 335 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 NSUN5Q96P11 429 aaKnown RBP23.7■■□□□ 1.38
FNTA-214ENST00000533998 CDK15Q96Q40 435 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 CDCP1Q9H5V8 836 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 SPACA6W5XKT8 324 aa23.7■■□□□ 1.38
FNTA-214ENST00000533998 ANKUB1A6NFN9 424 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 PLPP1O14494 284 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 PRAMEF2O60811 474 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 MYO1DO94832 1006 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 RPS17P08708 135 aaKnown RBP23.69■■□□□ 1.38
FNTA-214ENST00000533998 TNFRSF8P28908 595 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 CD96P40200 585 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 SLAMF1Q13291 335 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 CUL3Q13618 768 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 TUBA3CQ13748 450 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 TUBA3EQ6PEY2 450 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 BCORP1Q8N888 145 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 ST6GALNAC3Q8NDV1 305 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 ACMSDQ8TDX5 336 aa23.69■■□□□ 1.38
FNTA-214ENST00000533998 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.69■■□□□ 1.383e-10■■■■■ 88.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms