RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RAB15P59190 212 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 RAB39AQ14964 217 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 GTDC1Q4AE62 458 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 ARHGAP40Q5TG30 622 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 MLIPQ5VWP3 458 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 ASPGQ86U10 573 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 CBARPQ8N350 705 aaPredicted RBP16.85■□□□□ 0.29
PHRF1-205ENST00000533464 HSPBAP1Q96EW2 488 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 LGR4Q9BXB1 951 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 RC3H2Q9HBD1 1191 aaKnown RBP16.85■□□□□ 0.29
PHRF1-205ENST00000533464 PRAMEF33A0A0G2JMD5 474 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 PPP6CO00743 305 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 PRAMEF10O60809 474 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 HPRP00739 348 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 MOGQ16653 247 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 PAGE3Q5JUK9 113 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 GKN2Q86XP6 184 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 BBS10Q8TAM1 723 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 ZNF420Q8TAQ5 688 aaPredicted RBP16.85■□□□□ 0.29
PHRF1-205ENST00000533464 MYRFLQ96LU7 910 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 OR8D2Q9GZM6 311 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 HCFC1R1Q9NWW0 138 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 GGT1P19440 569 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 RGRP47804 291 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 CST6Q15828 149 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 MOAP1Q96BY2 351 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 DMRTB1Q96MA1 342 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 SAMD11Q96NU1 681 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.85■□□□□ 0.29
PHRF1-205ENST00000533464 MVB12BQ9H7P6 319 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 CENPMQ9NSP4 180 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 OR1A2Q9Y585 309 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 ADRB3P13945 408 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 SLC15A1P46059 708 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 VTCN1Q7Z7D3 282 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 OSTF1Q92882 214 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 BRD7Q9NPI1 651 aa16.85■□□□□ 0.29
PHRF1-205ENST00000533464 TCRBV5S1A1TA0A578 114 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 BLOC1S5-TXNDC5H3BN57 136 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 SCAMP2O15127 329 aaKnown RBP16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ADAM12O43184 909 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ETFAP13804 333 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 EDNRAP25101 427 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ARRB1P49407 418 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-205ENST00000533464 VEGFBP49765 207 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ZNF140P52738 457 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-205ENST00000533464 PAMR1Q6UXH9 720 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ASB18Q6ZVZ8 466 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ADAD1Q96M93 576 aaKnown RBP16.84■□□□□ 0.29
PHRF1-205ENST00000533464 CLSTN3Q9BQT9 956 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 BHLHE41Q9C0J9 482 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-205ENST00000533464 RNF38Q9H0F5 515 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 STOX2Q9P2F5 926 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-205ENST00000533464 A0A1W2PQ72 361 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 CAPN14A8MX76 684 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 C2orf74A8MZ97 194 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 GPR39O43194 453 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 DENRO43583 198 aaKnown RBP16.84■□□□□ 0.29
PHRF1-205ENST00000533464 IST1P53990 364 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 OR2B6P58173 313 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ZNF829Q3KNS6 432 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-205ENST00000533464 DPY19L2P1Q6NXN4 242 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.84■□□□□ 0.291e-12■□□□□ 10.6
PHRF1-205ENST00000533464 NR4A3Q92570 626 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 EPYCQ99645 322 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ACTL8Q9H568 366 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 AKAP11Q9UKA4 1901 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 CNTRLQ7Z7A1 2325 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 GRXCR1A8MXD5 290 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 CD72P21854 359 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 HRH2P25021 359 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 OR12D2P58182 307 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 C1orf61Q13536 156 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 NANOGNBQ7Z5D8 188 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 NUP43Q8NFH3 380 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 OR2AJ1Q8NGZ0 328 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 C1orf216Q8TAB5 229 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 FZD3Q9NPG1 666 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 SMIM30A4D0T7 59 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 OR6C74A6NCV1 312 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 H0YJX3 145 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 PSMD9O00233 223 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 MID1O15344 667 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 PRODHO43272 600 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 CDC123O75794 336 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ENTPD1P49961 510 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 FAM214AQ32MH5 1076 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 CATSPEREQ5SY80 951 aa16.84■□□□□ 0.29
PHRF1-205ENST00000533464 ITGA10O75578 1167 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 RPS17P08708 135 aaKnown RBP16.83■□□□□ 0.29
PHRF1-205ENST00000533464 MAP2K4P45985 399 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 PITPNAQ00169 270 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 AKIRIN2Q53H80 203 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 SLC36A4Q6YBV0 504 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 ZNF534Q76KX8 674 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 COMMD6Q7Z4G1 85 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 SLC22A4Q9H015 551 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 OR51I1Q9H343 314 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 IL21RQ9HBE5 538 aa16.83■□□□□ 0.29
PHRF1-205ENST00000533464 ERVK-18Q9QC07 812 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms