RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NEK2P51955 445 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 HNRNPFP52597 415 aaKnown RBP19.2■□□□□ 0.66
CCS-208ENST00000533244 AP5B1Q2VPB7 878 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 AGAP7PQ5VUJ5 663 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 IRAK1BP1Q5VVH5 260 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 OR4C11Q6IEV9 310 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 JMJD6Q6NYC1 403 aaPredicted RBP19.2■□□□□ 0.66
CCS-208ENST00000533244 ATG14Q6ZNE5 492 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 ZNF595Q8IYB9 648 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 AMER2Q8N7J2 671 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 RDH11Q8TC12 318 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 TRPC4APQ8TEL6 797 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 AGAP4Q96P64 663 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 CSF3RQ99062 836 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 CENPKQ9BS16 269 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 GSTO2Q9H4Y5 243 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 ZBTB20Q9HC78 741 aaPredicted RBP19.2■□□□□ 0.66
CCS-208ENST00000533244 NECTIN3Q9NQS3 549 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 PLAAQ9Y263 795 aa19.2■□□□□ 0.66
CCS-208ENST00000533244 HELZ2Q9BYK8 2649 aaKnown RBP19.2■□□□□ 0.66
CCS-208ENST00000533244 SLC28A2O43868 658 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 SEMA3DO95025 777 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 MYL2P10916 166 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 MAOAP21397 527 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 CD97P48960 835 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 HSD17B7P56937 341 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 AP2B1P63010 937 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 RCN2Q14257 317 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 PAPD4Q6PIY7 484 aaKnown RBP19.19■□□□□ 0.66
CCS-208ENST00000533244 ZCCHC7Q8N3Z6 543 aaKnown RBP19.19■□□□□ 0.66
CCS-208ENST00000533244 BANPQ8N9N5 519 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 FAM47BQ8NA70 645 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 PPP4R1Q8TF05 950 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 MAPKAP1Q9BPZ7 522 aa19.19■□□□□ 0.66
CCS-208ENST00000533244 SORBS1Q9BX66 1292 aaKnown RBP19.19■□□□□ 0.66
CCS-208ENST00000533244 C12orf65Q9H3J6 166 aaKnown RBP19.19■□□□□ 0.66
CCS-208ENST00000533244 MRPS33Q9Y291 106 aaKnown RBP19.19■□□□□ 0.66
CCS-208ENST00000533244 TGFBR3LH3BV60 316 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 OR4F21O95013 312 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 MLYCDO95822 493 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 ITGAMP11215 1152 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 BSGP35613 385 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 RAP1GDS1P52306 607 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 OR4D2P58180 307 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 NADK2Q4G0N4 442 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 CRB2Q5IJ48 1285 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 PRICKLE2Q7Z3G6 844 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 BRIX1Q8TDN6 353 aaKnown RBP19.18■□□□□ 0.66
CCS-208ENST00000533244 TM9SF4Q92544 642 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 APOPT1Q96IL0 206 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 SERPINI1Q99574 410 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 LPAR4Q99677 370 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 EPN3Q9H201 632 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 PRTFDC1Q9NRG1 225 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 STK38LQ9Y2H1 464 aa19.18■□□□□ 0.66
CCS-208ENST00000533244 CLDN4O14493 209 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 SORBS2O94875 1100 aaKnown RBP19.17■□□□□ 0.66
CCS-208ENST00000533244 DNAJB13P59910 316 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 LCP2Q13094 533 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 IFT88Q13099 833 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 MFAP5Q13361 173 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 EXT1Q16394 746 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 SLC6A19Q695T7 634 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 TTC19Q6DKK2 380 aaPredicted RBP19.17■□□□□ 0.66
CCS-208ENST00000533244 MRM1Q6IN84 353 aaKnown RBP19.17■□□□□ 0.66
CCS-208ENST00000533244 ISLR2Q6UXK2 745 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 M1APQ8TC57 530 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 LMF1Q96S06 567 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 SLC29A3Q9BZD2 475 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 ELOVL6Q9H5J4 265 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 DDX31Q9H8H2 851 aaKnown RBP19.17■□□□□ 0.66
CCS-208ENST00000533244 MMP25Q9NPA2 562 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 CPAMD8Q8IZJ3 1885 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 A0A0A6YYD5 115 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 CPA3P15088 417 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 PKNOX1P55347 436 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 SLC26A5P58743 744 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 NAA20P61599 178 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 ZNF844Q08AG5 666 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 BTBD16Q32M84 506 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 COLEC12Q5KU26 742 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 FAM219BQ5XKK7 198 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 H3F3CQ6NXT2 135 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 GPRIN3Q6ZVF9 776 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 SRRM1Q8IYB3 904 aaKnown RBP19.17■□□□□ 0.66
CCS-208ENST00000533244 Q8NA96 180 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 ARMC2Q8NEN0 867 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 PNPLA2Q96AD5 504 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 MTFMTQ96DP5 389 aaKnown RBP19.17■□□□□ 0.66
CCS-208ENST00000533244 PRM3Q9NNZ6 103 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 FARSBQ9NSD9 589 aaKnown RBP19.17■□□□□ 0.66
CCS-208ENST00000533244 OXSMQ9NWU1 459 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 MID2Q9UJV3 735 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 SNX6Q9UNH7 406 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 PLLPQ9Y342 182 aa19.17■□□□□ 0.66
CCS-208ENST00000533244 GCN1Q92616 2671 aaKnown RBP19.16■□□□□ 0.66
CCS-208ENST00000533244 BLACEA4D250 179 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 SYNDIG1LA6NDD5 238 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 SAGE2PA6NJ88 616 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 CTNSO60931 367 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms