RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 Q6ZSR9 355 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 COMMD6Q7Z4G1 85 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 GPR180Q86V85 440 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 LAPTM4BQ86VI4 370 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 CRLF3Q8IUI8 442 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZC3H7AQ8IWR0 971 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 C1orf52Q8N6N3 182 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 STARD8Q92502 1023 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 APIPQ96GX9 242 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 METTL2AQ96IZ6 378 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 CNTNAP3BQ96NU0 1288 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 SPSB2Q99619 263 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZNF717Q9BY31 904 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 CNTNAP3Q9BZ76 1288 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 TUBB1Q9H4B7 451 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 SEMA3GQ9NS98 782 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 RIC8BQ9NVN3 520 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 LYARQ9NX58 379 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 PHF11Q9UIL8 331 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 MKL2Q9ULH7 1088 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZMIZ1Q9ULJ6 1067 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 MRPS18BQ9Y676 258 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 CEP295Q9C0D2 2601 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 A0A0A6YYD5 115 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZNF891A8MT65 544 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 NPIPB8E9PQR5 432 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 FAM227AF5H4B4 570 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 B4GALT2O60909 372 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 CNOT3O75175 753 aaKnown RBP10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 GUCY1B2O75343 617 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 SEC22BO75396 215 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 JRKO75564 520 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 GBAP04062 536 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 FAM58BPP0C7Q3 252 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 CPN2P22792 545 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 PRPH2P23942 346 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 ITPKBP27987 946 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 MAPK12P53778 367 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 OCRLQ01968 901 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 NR6A1Q15406 480 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZSCAN26Q16670 478 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 MINDY4Q4G0A6 757 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 FAM69BQ5VUD6 431 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 MED25Q71SY5 747 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 METTL21AQ8WXB1 218 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 NACC2Q96BF6 587 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 C19orf60Q96EN9 201 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 PPP3R2Q96LZ3 170 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 MAPKAP1Q9BPZ7 522 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 CRB3Q9BUF7 120 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 LRTM1Q9HBL6 345 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 C1orf109Q9NX04 203 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 SIRT5Q9NXA8 310 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 KCMF1Q9P0J7 381 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 VTI1BQ9UEU0 232 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 C3orf18Q9UK00 162 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 FBXW2Q9UKT8 454 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 MRPS33Q9Y291 106 aaKnown RBP10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 CCL27Q9Y4X3 112 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 FRYQ5TBA9 3013 aa10.6□□□□□ -0.71
TRAPPC4-211ENST00000533012 GNG14A0A1W2PPG7 69 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 BLACEA4D250 179 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 IDSB3KWA1 339 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 CYR61O00622 381 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PCDH17O14917 1159 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 HDAC3O15379 428 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 NKX2-8O15522 239 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PROM1O43490 865 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 TMPRSS11DO60235 418 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PCDH7O60245 1069 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PRMT3O60678 531 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 SKAP2O75563 359 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 CDC123O75794 336 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 CYC1P08574 325 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 KITP10721 976 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 WT1P19544 449 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 MMP11P24347 488 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 TPP2P29144 1249 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 OTX2P32243 289 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 MDH1P40925 334 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 BUD31P41223 144 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 HK2P52789 917 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 GYS2P54840 703 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 TMPRSS3P57727 454 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 FOXL2P58012 376 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 TRA2BP62995 288 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 VAC14Q08AM6 782 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PDCD2Q16342 344 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 UGT8Q16880 541 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 ATP6AP1LQ52LC2 224 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 CRTC2Q53ET0 693 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 MRM1Q6IN84 353 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 GALNT18Q6P9A2 607 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 RGS9BPQ6ZS82 235 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 RAB43Q86YS6 212 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZNF595Q8IYB9 648 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 SHISA5Q8N114 240 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 EFCAB3Q8N7B9 438 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 PLPP5Q8NEB5 264 aa10.59□□□□□ -0.71
TRAPPC4-211ENST00000533012 C7orf57Q8NEG2 295 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms