RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 IL10RAQ13651 578 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 UGT8Q16880 541 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 TUBB8Q3ZCM7 444 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 RNF165Q6ZSG1 346 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 LAPTM4BQ86VI4 370 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 C1orf52Q8N6N3 182 aaKnown RBP21.02■□□□□ 0.96
LRRK1-208ENST00000532029 ZNF781Q8N8C0 355 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 LRRC8CQ8TDW0 803 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 SORT1Q99523 831 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 ZNF717Q9BY31 904 aaPredicted RBP21.02■□□□□ 0.96
LRRK1-208ENST00000532029 PFDN4Q9NQP4 134 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 THAP1Q9NVV9 213 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 LYARQ9NX58 379 aaKnown RBP21.02■□□□□ 0.96
LRRK1-208ENST00000532029 PHF11Q9UIL8 331 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 FBXW2Q9UKT8 454 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 MRPS33Q9Y291 106 aaKnown RBP21.02■□□□□ 0.96
LRRK1-208ENST00000532029 USP24Q9UPU5 2620 aa21.02■□□□□ 0.96
LRRK1-208ENST00000532029 SEC16AO15027 2179 aa21.02■□□□□ 0.95
LRRK1-208ENST00000532029 A0A0A6YYD5 115 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 B4GALT2O60909 372 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 CDC123O75794 336 aaPredicted RBP21.01■□□□□ 0.95
LRRK1-208ENST00000532029 KLK1P06870 262 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 RPL14P50914 215 aaKnown RBP21.01■□□□□ 0.95
LRRK1-208ENST00000532029 BTKQ06187 659 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 ACSM2AQ08AH3 577 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 SPIN4Q56A73 249 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 ACSM2BQ68CK6 577 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 COMMD6Q7Z4G1 85 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 SHISA5Q8N114 240 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 ARFGAP2Q8N6H7 521 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 EFCAB3Q8N7B9 438 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 ZNF75CPQ92670 426 aaPredicted RBP21.01■□□□□ 0.95
LRRK1-208ENST00000532029 MAPKAP1Q9BPZ7 522 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 C20orf27Q9GZN8 174 aa21.01■□□□□ 0.95
LRRK1-208ENST00000532029 KLF11O14901 512 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 PIP5K1BO14986 540 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 RSL1D1O76021 490 aaKnown RBP21■□□□□ 0.95
LRRK1-208ENST00000532029 GBAP04062 536 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 CYC1P08574 325 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 FAM58BPP0C7Q3 252 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 LINC00032P0C843 101 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 CPN2P22792 545 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 MMP11P24347 488 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 UGT3A2Q3SY77 523 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 CCNYL2Q5T2Q4 361 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 ATP1A1-AS1Q5TC04 95 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 GPR180Q86V85 440 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 TMEM151BQ8IW70 566 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 FAM47BQ8NA70 645 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 CHTF18Q8WVB6 975 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 METTL21AQ8WXB1 218 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 VPS50Q96JG6 964 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 IP6K3Q96PC2 410 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 VN1R1Q9GZP7 353 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 TUBB1Q9H4B7 451 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 LANCL2Q9NS86 450 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 MS4A12Q9NXJ0 267 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 PTGDR2Q9Y5Y4 395 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 FREM2Q5SZK8 3169 aa21■□□□□ 0.95
LRRK1-208ENST00000532029 FAM227AF5H4B4 570 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 PEX12O00623 359 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 CLDN4O14493 209 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 SNNO75324 88 aaPredicted RBP20.99■□□□□ 0.95
LRRK1-208ENST00000532029 SKAP2O75563 359 aaPredicted RBP20.99■□□□□ 0.95
LRRK1-208ENST00000532029 TLX1P31314 330 aaPredicted RBP20.99■□□□□ 0.95
LRRK1-208ENST00000532029 C19orf48Q6RUI8 117 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 THAP4Q8WY91 577 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 NACC2Q96BF6 587 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 APIPQ96GX9 242 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 CCT7Q99832 543 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 KCMF1Q9P0J7 381 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 HAO1Q9UJM8 370 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 POLHQ9Y253 713 aa20.99■□□□□ 0.95
LRRK1-208ENST00000532029 KMT2BQ9UMN6 2715 aaPredicted RBP20.99■□□□□ 0.95
LRRK1-208ENST00000532029 PCDH17O14917 1159 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 TMPRSS11DO60235 418 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 PRMT3O60678 531 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 ALOX12BO75342 701 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 GUCY1B2O75343 617 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 MYO1DO94832 1006 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 TPP2P29144 1249 aaPredicted RBP20.98■□□□□ 0.95
LRRK1-208ENST00000532029 BUD31P41223 144 aaPredicted RBP20.98■□□□□ 0.95
LRRK1-208ENST00000532029 MAPK12P53778 367 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 HNRNPH2P55795 449 aaKnown RBP20.98■□□□□ 0.95
LRRK1-208ENST00000532029 NR6A1Q15406 480 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 FAAH2Q6GMR7 532 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 MRM1Q6IN84 353 aaKnown RBP20.98■□□□□ 0.95
LRRK1-208ENST00000532029 MED25Q71SY5 747 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 PPP1R32Q7Z5V6 425 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 MRGPREQ86SM8 312 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 ZNF595Q8IYB9 648 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 ADAMTS17Q8TE56 1095 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 PTCHD1Q96NR3 888 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 CATSPER2Q96P56 530 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 CSF3RQ99062 836 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 WDR41Q9HAD4 459 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 LRTM1Q9HBL6 345 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 PRTFDC1Q9NRG1 225 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 RIC8BQ9NVN3 520 aa20.98■□□□□ 0.95
LRRK1-208ENST00000532029 PNPOQ9NVS9 261 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms