RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 SP3Q02447 781 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 RUNX1T1Q06455 604 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 HNRNPA0Q13151 305 aaKnown RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 TBCEQ15813 527 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 SLC5A12Q1EHB4 618 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 IFI44LQ53G44 452 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 RNASE12Q5GAN4 147 aaKnown RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 WASH2PQ6VEQ5 465 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 RAB43Q86YS6 212 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 ASCC1Q8N9N2 400 aaKnown RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 NLGN4YQ8NFZ3 816 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 C1GALT1C1Q96EU7 318 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 ART5Q96L15 291 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 YIPF4Q9BSR8 244 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 HTATIP2Q9BUP3 242 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 B4GALT6Q9UBX8 382 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 IL20RAQ9UHF4 553 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 SH2B3Q9UQQ2 575 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 GPR52Q9Y2T5 361 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 PCDHGA2Q9Y5H1 932 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 GSAPA4D1B5 854 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 OR6C75A6NL08 312 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 TLX2O43763 284 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 FZD6O60353 706 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 NCR1O76036 304 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 PTTG1O95997 202 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 CYP17A1P05093 508 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 CYP2A7P20853 494 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 CHMP24386 653 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 MAGEA11P43364 429 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 TAS2R50P59544 299 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 CDC42P60953 191 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 SELENOWP63302 87 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 ZNF45Q02386 682 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 PTSQ03393 145 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 SRSF11Q05519 484 aaKnown RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 LMAN2Q12907 356 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 FADDQ13158 208 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 INSL4Q14641 139 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 IQCCQ4KMZ1 466 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 OR2G6Q5TZ20 316 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 RETSATQ6NUM9 610 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 PCSK9Q8NBP7 692 aaKnown RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 CSGALNACT1Q8TDX6 532 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 IL17FQ96PD4 163 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 TM9SF2Q99805 663 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 WFDC6Q9BQY6 131 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 RPRD1BQ9NQG5 326 aaKnown RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 CNTRLQ7Z7A1 2325 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 ATG2BQ96BY7 2078 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 A0A1W2PQ45 241 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 A0A1W2PQY0 241 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 MEIOCA2RUB1 952 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 ISPDA4D126 451 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 ARHGEF33A8MVX0 844 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 SYN3O14994 580 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 TSPAN6O43657 245 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 BCHEP06276 602 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 TSPAN19P0C672 248 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 SERPINA4P29622 427 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 PRKAG1P54619 331 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 SREBF2Q12772 1141 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 HSPB3Q12988 150 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 TRIM71Q2Q1W2 868 aaKnown RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 SPDYE7PQ495Y7 208 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 CCDC58Q4VC31 144 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 PPP2R2DQ66LE6 453 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 DPY19L3Q6ZPD9 716 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 TESCQ96BS2 214 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 SLC29A3Q9BZD2 475 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 NMNAT1Q9HAN9 279 aaPredicted RBP9.44□□□□□ -0.9
SF3B2-206ENST00000528302 CLN6Q9NWW5 311 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 ZDHHC3Q9NYG2 299 aa9.44□□□□□ -0.9
SF3B2-206ENST00000528302 CACNA1CQ13936 2221 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 SCAMP2O15127 329 aaKnown RBP9.43□□□□□ -0.9
SF3B2-206ENST00000528302 SEMA3DO95025 777 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 CH25HO95992 272 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 GALTP07902 379 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 RNF144AP50876 292 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-206ENST00000528302 CTSCP53634 463 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 CDK6Q00534 326 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 CNTN1Q12860 1018 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 Q5BKY6 102 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 CLEC12AQ5QGZ9 265 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 PDZK1Q5T2W1 519 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 AGTRAPQ6RW13 159 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.43□□□□□ -0.91e-7■■■■□ 24
SF3B2-206ENST00000528302 SYNPOQ8N3V7 929 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 NEIL2Q969S2 332 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 CEP295NLQ96MC4 621 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 OR2A14Q96R47 310 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 OR4K3Q96R72 315 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 C2orf49Q9BVC5 232 aaPredicted RBP9.43□□□□□ -0.9
SF3B2-206ENST00000528302 CFAP97Q9P2B7 532 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 MOSPD1Q9UJG1 213 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 TMPRSS11EQ9UL52 423 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 CLEC4AQ9UMR7 237 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 KCNE1BA0A087WTH5 132 aa9.43□□□□□ -0.9
SF3B2-206ENST00000528302 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms