RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 SLAMF1Q13291 335 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 PDCD2Q16342 344 aaPredicted RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 SMU1Q2TAY7 513 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 ATP6AP1LQ52LC2 224 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 CCNYL2Q5T2Q4 361 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 Q6ZSR9 355 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 PARP9Q8IXQ6 854 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 OR5T3Q8NGG3 340 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 C11orf24Q96F05 449 aaPredicted RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 PEX11GQ96HA9 241 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 NAF1Q96HR8 494 aaKnown RBP17.67■□□□□ 0.42
PTPRK-218ENST00000525459 ACTL8Q9H568 366 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 LRTM1Q9HBL6 345 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 PRDM9Q9NQV7 894 aa17.67■□□□□ 0.42
PTPRK-218ENST00000525459 URB1O60287 2271 aaKnown RBP17.66■□□□□ 0.42
PTPRK-218ENST00000525459 CHD8Q9HCK8 2581 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 A0A087WV48 116 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 LSM1O15116 133 aaKnown RBP17.66■□□□□ 0.42
PTPRK-218ENST00000525459 KLF7O75840 302 aaPredicted RBP17.66■□□□□ 0.42
PTPRK-218ENST00000525459 B3GALT4O96024 378 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 TPP2P29144 1249 aaPredicted RBP17.66■□□□□ 0.42
PTPRK-218ENST00000525459 TLX1P31314 330 aaPredicted RBP17.66■□□□□ 0.42
PTPRK-218ENST00000525459 MAPK12P53778 367 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 OLR1P78380 273 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 BTKQ06187 659 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 SYT16Q17RD7 645 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 MRM1Q6IN84 353 aaKnown RBP17.66■□□□□ 0.42
PTPRK-218ENST00000525459 GPR180Q86V85 440 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 SPACA3Q8IXA5 215 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 ZNF595Q8IYB9 648 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 ZSCAN1Q8NBB4 408 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 VPS50Q96JG6 964 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 WDR41Q9HAD4 459 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 MEAF6Q9HAF1 191 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 SEMA3GQ9NS98 782 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 PNPOQ9NVS9 261 aa17.66■□□□□ 0.42
PTPRK-218ENST00000525459 WBP11Q9Y2W2 641 aaKnown RBP17.66■□□□□ 0.42
PTPRK-218ENST00000525459 PTRH2Q9Y3E5 179 aaKnown RBP17.66■□□□□ 0.42
PTPRK-218ENST00000525459 CLDN4O14493 209 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 PCDH7O60245 1069 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 SEC22BO75396 215 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 EEDO75530 441 aaKnown RBP17.65■□□□□ 0.42
PTPRK-218ENST00000525459 KLK1P06870 262 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 FAM58BPP0C7Q3 252 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 PCSK2P16519 638 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 TNFRSF17Q02223 184 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 RUNX2Q13950 521 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 EFCAB3Q8N7B9 438 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 OR2T11Q8NH01 316 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 STARD8Q92502 1023 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 TUBGCP3Q96CW5 907 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 APIPQ96GX9 242 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 IP6K3Q96PC2 410 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 SIKE1Q9BRV8 207 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 SORBS1Q9BX66 1292 aaKnown RBP17.65■□□□□ 0.42
PTPRK-218ENST00000525459 WDR70Q9NW82 654 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 RAXQ9Y2V3 346 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 MMACHCQ9Y4U1 282 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 PTGDR2Q9Y5Y4 395 aa17.65■□□□□ 0.42
PTPRK-218ENST00000525459 GNG14A0A1W2PPG7 69 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 ZNF891A8MT65 544 aaPredicted RBP17.64■□□□□ 0.41
PTPRK-218ENST00000525459 CREG1O75629 220 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 TGDSO95455 350 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 CPN2P22792 545 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 PPP2R1BP30154 601 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 HSD17B7P56937 341 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 KLC1Q07866 573 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 ZNF763Q0D2J5 394 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 SSPNQ14714 243 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 VWA2Q5GFL6 755 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 QSOX2Q6ZRP7 698 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 VASH2Q86V25 355 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 RAB43Q86YS6 212 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 FCRL1Q96LA6 429 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 DCBLD2Q96PD2 775 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 CRB3Q9BUF7 120 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 SLCO1B3Q9NPD5 702 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 KCMF1Q9P0J7 381 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 MARCOQ9UEW3 520 aaPredicted RBP17.64■□□□□ 0.41
PTPRK-218ENST00000525459 TMPRSS11DO60235 418 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 EDF1O60869 148 aaKnown RBP17.64■□□□□ 0.41
PTPRK-218ENST00000525459 CNOT3O75175 753 aaKnown RBP17.64■□□□□ 0.41
PTPRK-218ENST00000525459 RPL38P63173 70 aaKnown RBP17.64■□□□□ 0.41
PTPRK-218ENST00000525459 GUCY1A3Q02108 690 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 COL9A2Q14055 689 aaPredicted RBP17.64■□□□□ 0.41
PTPRK-218ENST00000525459 MINDY4Q4G0A6 757 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 FAM219BQ5XKK7 198 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 FAM47EQ6ZV65 393 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 MAPKAP1Q9BPZ7 522 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 FAIM2Q9BWQ8 316 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 NUF2Q9BZD4 464 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 SOX17Q9H6I2 414 aaPredicted RBP17.64■□□□□ 0.41
PTPRK-218ENST00000525459 LANCL2Q9NS86 450 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 FBXW2Q9UKT8 454 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 MKL2Q9ULH7 1088 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 ASB4Q9Y574 426 aa17.64■□□□□ 0.41
PTPRK-218ENST00000525459 CROCCQ5TZA2 2017 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 FREM2Q5SZK8 3169 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 IDSB3KWA1 339 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 TCP11X1B4DZS4 312 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms