RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 ADGRD2Q7Z7M1 963 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 RFLNBQ8N5W9 214 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 NIPA2Q8N8Q9 360 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 FAM71CQ8NEG0 241 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 GPRC5AQ8NFJ5 357 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 OR2T11Q8NH01 316 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 OR4L1Q8NH43 312 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 SCARB1Q8WTV0 552 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 RAB39BQ96DA2 213 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 MRPL53Q96EL3 112 aaKnown RBP4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 GIMAP5Q96F15 307 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 NKX3-1Q99801 234 aaPredicted RBP4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 TMEM231Q9H6L2 316 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 ATP13A3Q9H7F0 1226 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 ZNF319Q9P2F9 582 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 EPHA6Q9UF33 1036 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 U3KQV3 271 aa4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 MED1Q15648 1581 aaPredicted RBP4.43□□□□□ -1.7
CTNNA1-233ENST00000522052 A0A1B0GUV1 79 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 MSGN1A6NI15 193 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 NKX6-3A6NJ46 265 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 ACOT8O14734 319 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 P2RX6O15547 441 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 BUB3O43684 328 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 FGF17O60258 216 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 NADKO95544 446 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 TXNDC12O95881 172 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 CLPTM1O96005 669 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 RPL35AP18077 110 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 MAGEA4P43358 317 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 CCL11P51671 97 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 HSPA2P54652 639 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 POU3F1Q03052 451 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 PDZK1IP1Q13113 114 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 PDIA5Q14554 519 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 MEF2DQ14814 521 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 TMEM132DQ14C87 1099 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 NCAPD2Q15021 1401 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 CCDC6Q16204 474 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 ANKDD1AQ495B1 522 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 GPAT3Q53EU6 434 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 CMPK2Q5EBM0 449 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 C9orf50Q5SZB4 431 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 CES4AQ5XG92 561 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 HIST2H2AA3Q6FI13 130 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 ZNF790Q6PG37 636 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 C19orf48Q6RUI8 117 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 AFTPHQ6ULP2 937 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 FAM159AQ6UWV7 190 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 TMEM26Q6ZUK4 368 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 AMZ2Q86W34 360 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 ELMOD1Q8N336 334 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 MINDY2Q8NBR6 621 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 IPMKQ8NFU5 416 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 OR6M1Q8NGM8 313 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 SMPDL3AQ92484 453 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 SUSD6Q92537 303 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 VOPP1Q96AW1 172 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 TRIM44Q96DX7 344 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 VPS39Q96JC1 886 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 RPGRIP1Q96KN7 1286 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 AGPAT1Q99943 283 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 FUNDC2Q9BWH2 189 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 TDRD1Q9BXT4 1180 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 NMNAT2Q9BZQ4 307 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 EGLN1Q9GZT9 426 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 COQ10BQ9H8M1 238 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 MAN2C1Q9NTJ4 1040 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 IL20RAQ9UHF4 553 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 OR1A2Q9Y585 309 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 SELENOKQ9Y6D0 94 aa4.42□□□□□ -1.7
CTNNA1-233ENST00000522052 HMGXB3Q12766 1538 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 NPC1L1Q9UHC9 1359 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 CLDN3O15551 220 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 GRID2O43424 1007 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 SCGB2A1O75556 95 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 SYNGR4O95473 234 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 AK1P00568 194 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 PROS1P07225 676 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 APRTP07741 180 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 UMODP07911 640 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 F7P08709 466 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 TPBGLP0DKB5 382 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 SNHG28P0DPA3 235 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 RALAP11233 206 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 ALDH3B1P43353 468 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 ARL16Q0P5N6 197 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 HSPA14Q0VDF9 509 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 OR1C1Q15619 314 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 GTDC1Q4AE62 458 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 MPPE1Q53F39 396 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 RIPPLY2Q5TAB7 128 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 ATP1A1-AS1Q5TC04 95 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 ARHGEF16Q5VV41 709 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 SLC35E4Q6ICL7 350 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 CAPN13Q6MZZ7 669 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 ARSKQ6UWY0 536 aa4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 MEX3BQ6ZN04 569 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-233ENST00000522052 SH2D5Q6ZV89 423 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms