RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 MAP7Q14244 749 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 RIPOR1Q6ZS17 1223 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 SPATA21Q7Z572 469 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 SPATA19Q7Z5L4 167 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 GPR180Q86V85 440 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 C16orf78Q8WTQ4 265 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 TM4SF18Q96CE8 201 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 ASIC5Q9NY37 505 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 TRPC4Q9UBN4 977 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 ACSL6Q9UKU0 697 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 EIF3LQ9Y262 564 aaKnown RBP22.82■■□□□ 1.24
PVT1-212ENST00000521951 WDFY3Q8IZQ1 3526 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 CCDC88CQ9P219 2028 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 STMND1H3BQB6 276 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 ALDOCP09972 364 aaKnown RBP22.82■■□□□ 1.24
PVT1-212ENST00000521951 RNH1P13489 461 aaKnown RBP22.82■■□□□ 1.24
PVT1-212ENST00000521951 ACPPP15309 386 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 SDC1P18827 310 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 DIO3P55073 304 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 TRA2BP62995 288 aaKnown RBP22.82■■□□□ 1.24
PVT1-212ENST00000521951 TMEM198Q66K66 360 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 OVCH1Q7RTY7 1134 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 LIX1Q8N485 282 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 ESX1Q8N693 406 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 C10orf82Q8WW14 230 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 PEX11GQ96HA9 241 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 ZNF578Q96N58 590 aaPredicted RBP22.82■■□□□ 1.24
PVT1-212ENST00000521951 RILPQ96NA2 401 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 CCT8L2Q96SF2 557 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 NOP53Q9NZM5 478 aaKnown RBP22.82■■□□□ 1.24
PVT1-212ENST00000521951 IFT80Q9P2H3 777 aaPredicted RBP22.82■■□□□ 1.24
PVT1-212ENST00000521951 BAIAP2L1Q9UHR4 511 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 ATG4BQ9Y4P1 393 aa22.82■■□□□ 1.24
PVT1-212ENST00000521951 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.81■■□□□ 1.24
PVT1-212ENST00000521951 E9PBE3 544 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 SNX3O60493 162 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 KLHL41O60662 606 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 RAD1O60671 282 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 PRPS2P11908 318 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 RAB38P57729 211 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 TAS2R50P59544 299 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 ZNF763Q0D2J5 394 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 PARP9Q8IXQ6 854 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 NLGN4XQ8N0W4 816 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 EFCAB3Q8N7B9 438 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 NLGN4YQ8NFZ3 816 aaPredicted RBP22.81■■□□□ 1.24
PVT1-212ENST00000521951 EGLN2Q96KS0 407 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 PHF11Q9UIL8 331 aa22.81■■□□□ 1.24
PVT1-212ENST00000521951 A0A1W2PR48 441 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 FAM227AF5H4B4 570 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 UBDO15205 165 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 PROM1O43490 865 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 CPN2P22792 545 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 XCR1P46094 333 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 SHC2P98077 582 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 MLIPQ5VWP3 458 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 PIGWQ7Z7B1 504 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.8■■□□□ 1.24
PVT1-212ENST00000521951 TSSK3Q96PN8 268 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 CSF3RQ99062 836 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 MKKSQ9NPJ1 570 aaPredicted RBP22.8■■□□□ 1.24
PVT1-212ENST00000521951 TEX10Q9NXF1 929 aaPredicted RBP22.8■■□□□ 1.24
PVT1-212ENST00000521951 CTSFQ9UBX1 484 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 ZNF282Q9UDV7 671 aaPredicted RBP22.8■■□□□ 1.24
PVT1-212ENST00000521951 G3BP2Q9UN86 482 aaKnown RBP22.8■■□□□ 1.24
PVT1-212ENST00000521951 AKAP13Q12802 2813 aa22.8■■□□□ 1.24
PVT1-212ENST00000521951 GUCY1B2O75343 617 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 G6PDP11413 515 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 ERV3-1Q14264 604 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 VWA2Q5GFL6 755 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 C18orf63Q68DL7 685 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 MRPL14Q6P1L8 145 aaKnown RBP22.79■■□□□ 1.24
PVT1-212ENST00000521951 FAM198BQ6UWH4 519 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 DTX1Q86Y01 620 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 CDC26Q8NHZ8 85 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 FKBP10Q96AY3 582 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 MARK4Q96L34 752 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 MYNNQ9NPC7 610 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 AIG1Q9NVV5 245 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 MS4A12Q9NXJ0 267 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 SPACA6W5XKT8 324 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 CACNA1AO00555 2505 aa22.79■■□□□ 1.24
PVT1-212ENST00000521951 IGLV3-12A0A075B6K2 115 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 CYR61O00622 381 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 ALBP02768 609 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 IL3P08700 152 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 GSTM5P46439 218 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 TNFRSF17Q02223 184 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 TBC1D25Q3MII6 688 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 FAM71E1Q6IPT2 247 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 ZC3H7AQ8IWR0 971 aaKnown RBP22.78■■□□□ 1.24
PVT1-212ENST00000521951 FAM47BQ8NA70 645 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 CLHC1Q8NHS4 586 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 NKD1Q969G9 470 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 TBC1D20Q96BZ9 403 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 RBCK1Q9BYM8 510 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 SLC26A1Q9H2B4 701 aa22.78■■□□□ 1.24
PVT1-212ENST00000521951 GPN3Q9UHW5 284 aaPredicted RBP22.78■■□□□ 1.24
PVT1-212ENST00000521951 WBP11Q9Y2W2 641 aaKnown RBP22.78■■□□□ 1.24
PVT1-212ENST00000521951 C9J4A7 227 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms