RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CUL1Q13616 776 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 MMEL1Q495T6 779 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ALFQ53S48 1182 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 FAM133BQ5BKY9 247 aaKnown RBP3.78□□□□□ -1.8
CLK4-207ENST00000520909 FAM182AQ5T1J6 154 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ANKRD54Q6NXT1 300 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 SLC36A4Q6YBV0 504 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 NLRP14Q86W24 1093 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ZNF354CQ86Y25 554 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ARHGAP12Q8IWW6 846 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ZNF683Q8IZ20 524 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 CMTM8Q8IZV2 173 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ATPAF2Q8N5M1 289 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 NPWQ8N729 165 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 RTL3Q8N8U3 475 aaKnown RBP3.78□□□□□ -1.8
CLK4-207ENST00000520909 CCDC110Q8TBZ0 833 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 DUSP19Q8WTR2 217 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 DEPDC1BQ8WUY9 529 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ANKRD7Q92527 254 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 SLCO2A1Q92959 643 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 LRRC45Q96CN5 670 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 TMA16Q96EY4 203 aaKnown RBP3.78□□□□□ -1.8
CLK4-207ENST00000520909 SNF8Q96H20 258 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ST6GAL2Q96JF0 529 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 LRR1Q96L50 414 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 GDAP1L1Q96MZ0 367 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 OLFM3Q96PB7 478 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 PRMT1Q99873 361 aaKnown RBP3.78□□□□□ -1.8
CLK4-207ENST00000520909 FERMT1Q9BQL6 677 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 HAUS8Q9BT25 410 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 PRO3102Q9H379 93 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 FAM114A2Q9NRY5 505 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 SUFUQ9UMX1 484 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ARHGAP26Q9UNA1 814 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 NEU3Q9UQ49 428 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 CCL26Q9Y258 94 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ZNF510Q9Y2H8 683 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 ZFP37Q9Y6Q3 630 aaPredicted RBP3.78□□□□□ -1.8
CLK4-207ENST00000520909 PATJQ8NI35 1801 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 CLUHO75153 1309 aa3.78□□□□□ -1.8
CLK4-207ENST00000520909 TNRC18O15417 2968 aaPredicted RBP3.78□□□□□ -1.8
CLK4-207ENST00000520909 PRRC2BQ5JSZ5 2229 aaKnown RBP3.78□□□□□ -1.8
CLK4-207ENST00000520909 ZNF638Q14966 1978 aaKnown RBP3.78□□□□□ -1.8
CLK4-207ENST00000520909 PLXNA3P51805 1871 aa3.78□□□□□ -1.81
CLK4-207ENST00000520909 GREB1Q4ZG55 1949 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 C17orf113A0A1B0GUU1 675 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 C5orf60A6NFR6 353 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 H0Y626 953 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 KCNK1O00180 336 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 NR5A2O00482 541 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 DNALI1O14645 258 aaPredicted RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 WDR1O75083 606 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 CLDN11O75508 207 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 ZNF189O75820 626 aaPredicted RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 NEBLO76041 1014 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 SEC31AO94979 1220 aaKnown RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 PRAMEF12O95522 483 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 RHOCP08134 193 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 SLC2A4P14672 509 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 MYOD1P15172 320 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 HOXB8P17481 243 aaPredicted RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 IVDP26440 423 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 GARSP41250 739 aaKnown RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 LMAN1P49257 510 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 NUMBP49757 651 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 SGSHP51688 502 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 CDH4P55283 916 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 GNB1P62873 340 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 PDE1BQ01064 536 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 CAV1Q03135 178 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 PPIDQ08752 370 aaKnown RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 WASHC5Q12768 1159 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 GAGE5Q13069 117 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 GAGE6Q13070 117 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 KCNC3Q14003 757 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 LRIT3Q3SXY7 679 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 PARP15Q460N3 678 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 C4orf22Q6V702 233 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 TMEM184AQ6ZMB5 413 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 LEKR1Q6ZMV7 388 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 TPGS1Q6ZTW0 290 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 MOB3CQ70IA8 216 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 CHST9Q7L1S5 443 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 GET4Q7L5D6 327 aaPredicted RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 TAOK1Q7L7X3 1001 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 PID1Q7Z2X4 250 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 NOTCH2NLQ7Z3S9 236 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 LRRC49Q8IUZ0 686 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 ARID3BQ8IVW6 561 aaPredicted RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 FOXRED2Q8IWF2 684 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 BBS7Q8IWZ6 715 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 CCDC13Q8IYE1 715 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 UMODL1-AS1Q8N2C9 162 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 CARNMT1Q8N4J0 409 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 EIF1ADQ8N9N8 165 aaKnown RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 TDRD5Q8NAT2 981 aaKnown RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 HJURPQ8NCD3 748 aaPredicted RBP3.77□□□□□ -1.81
CLK4-207ENST00000520909 BBOF1Q8ND07 529 aa3.77□□□□□ -1.81
CLK4-207ENST00000520909 FBXO25Q8TCJ0 367 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms