RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 HLA-DOAP06340 250 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 RB1P06400 928 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 GP1BAP07359 652 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 ADRA2AP08913 450 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 LBPP18428 481 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 CD79BP40259 229 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 INPP1P49441 399 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 CTSCP53634 463 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 RAB10P61026 200 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 RAC1P63000 192 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 ECH1Q13011 328 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 SURF1Q15526 300 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 TARBP2Q15633 366 aaKnown RBP7.03□□□□□ -1.28
CPNE4-208ENST00000511604 ALKAL2Q6UX46 152 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 KDELC2Q7Z4H8 507 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 OR1S1Q8NH92 325 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 GRAPLQ8TC17 118 aaPredicted RBP7.03□□□□□ -1.28
CPNE4-208ENST00000511604 SLC25A46Q96AG3 418 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 C14orf144Q96I85 54 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 PPM1MQ96MI6 270 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 TAPBPLQ9BX59 468 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 GSDMCQ9BYG8 508 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 RHBGQ9H310 441 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 PPP1R3EQ9H7J1 279 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 ATP13A1Q9HD20 1204 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 TAS2R16Q9NYV7 291 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 COX16Q9P0S2 106 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 SCP2D1Q9UJQ7 156 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 CLCA2Q9UQC9 943 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 STYXL1Q9Y6J8 313 aa7.03□□□□□ -1.28
CPNE4-208ENST00000511604 MEIKINA0A087WXM9 373 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 FAM95CA0A1B0GW59 222 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 SOWAHBA6NEL2 793 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 ANXA2P2A6NMY6 339 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 G3V3Q6 166 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 PPM1DO15297 605 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 SDC3O75056 442 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 BEST1O76090 585 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 OR4F21O95013 312 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 DDX6P26196 483 aaKnown RBP eCLIP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 SLC6A1P30531 599 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 LCN1P31025 176 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 MAGEA2P43356 314 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 NUDT6P53370 316 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 MXD1Q05195 221 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 ST3GAL4Q11206 333 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 ILKQ13418 452 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 LRRC32Q14392 662 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 EIF4HQ15056 248 aaKnown RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 ZNF648Q5T619 568 aaPredicted RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 OR4F3Q6IEY1 312 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 TMEM207Q6UWW9 146 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 LDB1Q86U70 411 aaPredicted RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 FAM131BQ86XD5 332 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 CBLN2Q8IUK8 224 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 CPXCR1Q8N123 301 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 C10orf111Q8N326 155 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 GMCL1P1Q8NEA9 526 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 OR2T12Q8NG77 320 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 OR2T35Q8NGX2 323 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 SCARB1Q8WTV0 552 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 OTUB1Q96FW1 271 aaPredicted RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 ZNF583Q96ND8 569 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 OR51J1Q9H342 316 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 AGO3Q9H9G7 860 aaKnown RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 LATS2Q9NRM7 1088 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 MED11Q9P086 117 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 PCDHGC4Q9Y5F7 938 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 PCDHGA6Q9Y5G7 932 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 PCDHGA5Q9Y5G8 931 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 PCDHGA1Q9Y5H4 931 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 UBIAD1Q9Y5Z9 338 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 USP3Q9Y6I4 520 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 SLX4Q8IY92 1834 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 OTOFQ9HC10 1997 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 C5orf52A6NGY3 159 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 RHPN2P1A8MT19 583 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 SGK494L7N484 410 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 GPR171O14626 319 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 PEX10O60683 326 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 DIRAS1O95057 198 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 SIX6O95475 246 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 PAK4O96013 591 aaPredicted RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 C1QCP02747 245 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 WARSP23381 471 aaKnown RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 PRDX3P30048 256 aaKnown RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 HSPA7P48741 367 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 RAB4BP61018 213 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 GABREP78334 506 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 ZNF33AQ06730 810 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 NPRL3Q12980 569 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 HNRNPA0Q13151 305 aaKnown RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 IRF4Q15306 451 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 P2RY14Q15391 338 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 NR6A1Q15406 480 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 CCDC85BQ15834 202 aaPredicted RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 UNC50Q53HI1 259 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 FAM109BQ6ICB4 259 aaPredicted RBP7.02□□□□□ -1.29
CPNE4-208ENST00000511604 AFTPHQ6ULP2 937 aa7.02□□□□□ -1.29
CPNE4-208ENST00000511604 HSDL2Q6YN16 418 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms