RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ARL10Q8N8L6 244 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 OR10V1Q8NGI7 309 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 MAGEC3Q8TD91 643 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 NOC3LQ8WTT2 800 aaKnown RBP5.9□□□□□ -1.46
USP53-206ENST00000510737 SPAG5Q96R06 1193 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 FAM167BQ9BTA0 163 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 LRRC1Q9BTT6 524 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 LRRC61Q9BV99 259 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 SLC17A9Q9BYT1 436 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 SMYD3Q9H7B4 428 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 MMP25Q9NPA2 562 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 RRN3Q9NYV6 651 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 LUZP4Q9P127 313 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 APPL1Q9UKG1 709 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 FAF1Q9UNN5 650 aaPredicted RBP5.9□□□□□ -1.46
USP53-206ENST00000510737 AMDHD2Q9Y303 409 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 MRPS18BQ9Y676 258 aaKnown RBP5.9□□□□□ -1.46
USP53-206ENST00000510737 CYP46A1Q9Y6A2 500 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 MN1Q10571 1320 aaPredicted RBP5.9□□□□□ -1.47
USP53-206ENST00000510737 MCF2LO15068 1137 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 LUC7L3O95232 432 aaKnown RBP5.89□□□□□ -1.47
USP53-206ENST00000510737 ADORA2BP29275 332 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 ABCD1P33897 745 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 NDST1P52848 882 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 PFN3P60673 137 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 ZRSR2Q15696 482 aaKnown RBP5.89□□□□□ -1.47
USP53-206ENST00000510737 ZRANB3Q5FWF4 1079 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 ZC2HC1BQ5TFG8 222 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 FAM46CQ5VWP2 391 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 CBWD2Q8IUF1 395 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 MFN1Q8IWA4 741 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 RNF113BQ8IZP6 322 aaKnown RBP5.89□□□□□ -1.47
USP53-206ENST00000510737 CARNMT1Q8N4J0 409 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 PLD5Q8N7P1 536 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 NECAB1Q8N987 351 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 STARD8Q92502 1023 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 KLF6Q99612 283 aaPredicted RBP5.89□□□□□ -1.47
USP53-206ENST00000510737 RAB34Q9BZG1 259 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 RDH14Q9HBH5 336 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 BLOC1S4Q9NUP1 217 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 FAM49BQ9NUQ9 324 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 HMGXB4Q9UGU5 601 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 APOBEC3BQ9UH17 382 aaKnown RBP5.89□□□□□ -1.47
USP53-206ENST00000510737 TAGLN3Q9UI15 199 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 SUFUQ9UMX1 484 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 RP1L1Q8IWN7 2480 aaPredicted RBP5.89□□□□□ -1.47
USP53-206ENST00000510737 CROCCQ5TZA2 2017 aa5.89□□□□□ -1.47
USP53-206ENST00000510737 FBN1P35555 2871 aaKnown RBP5.88□□□□□ -1.47
USP53-206ENST00000510737 ZNF233A6NK53 670 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 LRRTM2O43300 516 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 CTSLP07711 333 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 FAM200BP0CF97 657 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 CD99P14209 185 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 ITGA3P26006 1051 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 RABIFP47224 123 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 YWHAGP61981 247 aaKnown RBP eCLIP5.88□□□□□ -1.47
USP53-206ENST00000510737 RPS24P62847 133 aaKnown RBP5.88□□□□□ -1.47
USP53-206ENST00000510737 MC1RQ01726 317 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 TAF5Q15542 800 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 FAM133BQ5BKY9 247 aaKnown RBP5.88□□□□□ -1.47
USP53-206ENST00000510737 TRNP1Q6NT89 227 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 LINGO4Q6UY18 593 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 WDR49Q8IV35 697 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 GPD1LQ8N335 351 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 OR6C4Q8NGE1 309 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 OR8D1Q8WZ84 308 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 NDRG1Q92597 394 aaKnown RBP5.88□□□□□ -1.47
USP53-206ENST00000510737 ART4Q93070 314 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 KIAA1143Q96AT1 154 aaPredicted RBP5.88□□□□□ -1.47
USP53-206ENST00000510737 SNRNP40Q96DI7 357 aaKnown RBP5.88□□□□□ -1.47
USP53-206ENST00000510737 TBATAQ96M53 351 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 CD180Q99467 661 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 DDA1Q9BW61 102 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 INTS2Q9H0H0 1204 aaKnown RBP5.88□□□□□ -1.47
USP53-206ENST00000510737 MAGEE1Q9HCI5 957 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 PDRG1Q9NUG6 133 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 ASF1BQ9NVP2 202 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 SLC39A1Q9NY26 324 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 KIAA1456Q9P272 454 aa5.88□□□□□ -1.47
USP53-206ENST00000510737 IGHV5-10-1A0A0J9YXX1 117 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 ANKUB1A6NFN9 424 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 DVL1O14640 695 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 FPGTO14772 594 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 CRLF1O75462 422 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 MAOAP21397 527 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 PTGER4P35408 488 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 PRPHP41219 470 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 DVL1P1P54792 670 aaPredicted RBP5.87□□□□□ -1.47
USP53-206ENST00000510737 TRIM29Q14134 588 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 CEACAM20Q6UY09 585 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 APLFQ8IW19 511 aaPredicted RBP5.87□□□□□ -1.47
USP53-206ENST00000510737 HVCN1Q96D96 273 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 PRICKLE1Q96MT3 831 aaPredicted RBP5.87□□□□□ -1.47
USP53-206ENST00000510737 COG8Q96MW5 612 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 ACCSQ96QU6 501 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 MRPL40Q9NQ50 206 aaKnown RBP5.87□□□□□ -1.47
USP53-206ENST00000510737 ALKBH4Q9NXW9 302 aa5.87□□□□□ -1.47
USP53-206ENST00000510737 AKAP7Q9P0M2 348 aaPredicted RBP5.87□□□□□ -1.47
USP53-206ENST00000510737 TBC1D7Q9P0N9 293 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms