RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CDC73Q6P1J9 531 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 PLEKHM3Q6ZWE6 761 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 SLC43A3Q8NBI5 491 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 PJA1Q8NG27 643 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 ZNF671Q8TAW3 534 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 ZNF300Q96RE9 604 aaPredicted RBP14.28□□□□□ -0.12
USP38-202ENST00000510377 REEP4Q9H6H4 257 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 GLOD5A6NK44 160 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 TRIM64CA6NLI5 447 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 ENTPD6O75354 484 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 TIA1P31483 386 aaKnown RBP eCLIP14.28□□□□□ -0.12
USP38-202ENST00000510377 PTGER1P34995 402 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 ANXA11P50995 505 aaKnown RBP14.28□□□□□ -0.12
USP38-202ENST00000510377 TBCEQ15813 527 aaPredicted RBP14.28□□□□□ -0.12
USP38-202ENST00000510377 BCDIN3DQ7Z5W3 292 aaKnown RBP14.28□□□□□ -0.12
USP38-202ENST00000510377 NPAS4Q8IUM7 802 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 VRK3Q8IV63 474 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 TIGD4Q8IY51 512 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 IL17FQ96PD4 163 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 PRAMEF33A0A0G2JMD5 474 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 PRAMEF10O60809 474 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 GUCY1B2O75343 617 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 IL3P08700 152 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 ATF6P18850 670 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 NTSP30990 170 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 CD70P32970 193 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 GINS1Q14691 196 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 SLC46A3Q7Z3Q1 461 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 UFD1Q92890 307 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 UBE2E3Q969T4 207 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 MND1Q9BWT6 205 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 NMNAT1Q9HAN9 279 aaPredicted RBP14.28□□□□□ -0.12
USP38-202ENST00000510377 BEX1Q9HBH7 125 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 SEC14L4Q9UDX3 406 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 PSORS1C1Q9UIG5 152 aa14.28□□□□□ -0.12
USP38-202ENST00000510377 POLR2AP24928 1970 aaKnown RBP14.28□□□□□ -0.12
USP38-202ENST00000510377 A0A1W2PQL4 384 aaPredicted RBP14.27□□□□□ -0.12
USP38-202ENST00000510377 SELPP16109 830 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 BTBD16Q32M84 506 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 C9orf64Q5T6V5 341 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 GDPD3Q7L5L3 318 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 C16orf62Q7Z3J2 963 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 GRPEL2Q8TAA5 225 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 ZFP3Q96NJ6 502 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 SORBS1Q9BX66 1292 aaKnown RBP14.27□□□□□ -0.12
USP38-202ENST00000510377 MTG2Q9H4K7 406 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 NLKQ9UBE8 527 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 LHX3Q9UBR4 397 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 ZNF639Q9UID6 485 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 ENTPD4Q9Y227 616 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 PCDHGA6Q9Y5G7 932 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 DOCK1Q14185 1865 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 NOS1APO75052 506 aaPredicted RBP14.27□□□□□ -0.12
USP38-202ENST00000510377 HLA-EP13747 358 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 SLC19A1P41440 591 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 CTSOP43234 321 aaPredicted RBP14.27□□□□□ -0.12
USP38-202ENST00000510377 NRIP1P48552 1158 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 MICAQ29983 383 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 ATAD3CQ5T2N8 411 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 TRIM46Q7Z4K8 759 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 VN1R5Q7Z5H4 357 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 GATAD2BQ8WXI9 593 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 PDLIM5Q96HC4 596 aaKnown RBP14.27□□□□□ -0.12
USP38-202ENST00000510377 SLC12A9Q9BXP2 914 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 RHBGQ9H310 441 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 GPR52Q9Y2T5 361 aa14.27□□□□□ -0.12
USP38-202ENST00000510377 TRIP12Q14669 1992 aaPredicted RBP14.27□□□□□ -0.13
USP38-202ENST00000510377 ISM1B1AKI9 464 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 GRM6O15303 877 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 CLTBP09497 229 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 TGM1P22735 817 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 IFNGR2P38484 337 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 PRMT2P55345 433 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 CAV3P56539 151 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 C17orf99Q6UX52 265 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 ZNF551Q7Z340 670 aaPredicted RBP14.27□□□□□ -0.13
USP38-202ENST00000510377 IQCHQ86VS3 1027 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 LAX1Q8IWV1 398 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 OR7G3Q8NG95 312 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 POF1BQ8WVV4 589 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 SORCS1Q8WY21 1168 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 WBP2Q969T9 261 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 FKBP10Q96AY3 582 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 ZNF558Q96NG5 402 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 RACGAP1Q9H0H5 632 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 MED28Q9H204 178 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 SIRT5Q9NXA8 310 aa14.27□□□□□ -0.13
USP38-202ENST00000510377 FAM172BPA6NC97 362 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 ARHGAP33O14559 1287 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 CELP19835 753 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 AOAHP28039 575 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 HTR2BP41595 481 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 LRRC26Q2I0M4 334 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 ZNF630Q2M218 657 aaPredicted RBP14.26□□□□□ -0.13
USP38-202ENST00000510377 COX20Q5RI15 118 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 MORN1Q5T089 497 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 C22orf39Q6P5X5 142 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 MACC1Q6ZN28 852 aa14.26□□□□□ -0.13
USP38-202ENST00000510377 MFSD4AQ8N468 514 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms