RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SRRQ9GZT4 340 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 CHST8Q9H2A9 424 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 CCSER2Q9H7U1 834 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 ANKRA2Q9H9E1 313 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 ISYNA1Q9NPH2 558 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 IL26Q9NPH9 171 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 SPATA6Q9NWH7 488 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 NDUFB11Q9NX14 153 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 SIRT5Q9NXA8 310 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 MRPL39Q9NYK5 338 aaKnown RBP4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF226Q9NYT6 803 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 SH3BP4Q9P0V3 963 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 AASSQ9UDR5 926 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 ATP6V1HQ9UI12 483 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 KLF15Q9UIH9 416 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 RAB23Q9ULC3 237 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 TBC1D24Q9ULP9 559 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 MGAT4BQ9UQ53 548 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 KLHL20Q9Y2M5 609 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 GSTK1Q9Y2Q3 226 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 ASB4Q9Y574 426 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 SNX8Q9Y5X2 465 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 ENPP4Q9Y6X5 453 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 V9GYH0 126 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 POLR2AP24928 1970 aaKnown RBP4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 ELOA3CA0A087WX78 387 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 A0A1W2PQ09 198 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 C1orf226A1L170 272 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 FABP12A6NFH5 140 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ELOA3DA6NLF2 546 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 AGAP14A8MT82 685 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 A8MU76 341 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 C5orf58C9J3I9 102 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TGFBR3LH3BV60 316 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TLR4O00206 839 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 GFRA2O00451 464 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAAHO00519 579 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CTDSP2O14595 271 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ORC5O43913 435 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 STC2O76061 302 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SEMA3DO95025 777 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 IGHA2P01877 340 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 IFNW1P05000 195 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ANXA4P09525 319 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TSPAN19P0C672 248 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CKMT1AP12532 417 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 OSMP13725 252 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 BPIP17213 487 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PRKCAP17252 672 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ATF6P18850 670 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 MYL12AP19105 171 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 MAGP20916 626 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CBLP22681 906 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TACR1P25103 407 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 AOAHP28039 575 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 EPHA2P29317 976 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 WEE1P30291 646 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PKLRP30613 574 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CORO1AP31146 461 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TIA1P31483 386 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CHI3L1P36222 383 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TGFBR1P36897 503 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CRATP43155 626 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 XCR1P46094 333 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC9A3P48764 834 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 INPP1P49441 399 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 NUDT6P53370 316 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ARPP19P56211 112 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 WNT3P56703 355 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 NKX3-2P78367 333 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ARF5P84085 180 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CDK6Q00534 326 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 FPGSQ05932 587 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 MRPL28Q13084 256 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC14A1Q13336 389 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ILKQ13418 452 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CDH18Q13634 790 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 E2F2Q14209 437 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 LARS2Q15031 903 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PTGES3Q15185 160 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CHRNA6Q15825 494 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TAF12Q16514 161 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 OCLNQ16625 522 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SWI5Q1ZZU3 235 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMEM44Q2T9K0 475 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PTCHD3Q3KNS1 767 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ELOA3BQ3SY89 546 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 XKR6Q5GH73 641 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC25A30Q5SVS4 291 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC35F1Q5T1Q4 408 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 MFSD14CQ5VZR4 134 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 BICRALQ6AI39 1079 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 FRMPD2BQ6IN97 320 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 CXorf57Q6NSI4 855 aaKnown RBP4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 KIAA1211LQ6NV74 962 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 MZT2AQ6P582 158 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 PLET1Q6UQ28 207 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 ANGPTL8Q6UXH0 198 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 DLK2Q6UY11 383 aa4.75□□□□□ -1.65
HMGB3P16-201ENST00000508037 TPRG1Q6ZUI0 275 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms