RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TIE1P35590 1138 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 MASP1P48740 699 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 RPS26P11Q5JNZ5 115 aaPredicted RBP13.84□□□□□ -0.19
DDX41-208ENST00000507955 UBE2Q1Q7Z7E8 422 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 HDDC3Q8N4P3 179 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 ZNF514Q96K75 400 aaPredicted RBP13.84□□□□□ -0.19
DDX41-208ENST00000507955 PBX4Q9BYU1 374 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 BHLHE41Q9C0J9 482 aaPredicted RBP13.84□□□□□ -0.19
DDX41-208ENST00000507955 TRIT1Q9H3H1 467 aaKnown RBP13.84□□□□□ -0.19
DDX41-208ENST00000507955 AKIP1Q9NQ31 210 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 MIEF1Q9NQG6 463 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 NDUFAF4Q9P032 175 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 ZNF282Q9UDV7 671 aaPredicted RBP13.84□□□□□ -0.19
DDX41-208ENST00000507955 PCDHGA10Q9Y5H3 936 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 PMF1-BGLAPU3KQ54 211 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 OR52A4PA6NMU1 304 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 GPR37L1O60883 481 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 PRKRAO75569 313 aaKnown RBP13.84□□□□□ -0.19
DDX41-208ENST00000507955 SCARB2Q14108 478 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 GANABQ14697 944 aaKnown RBP13.84□□□□□ -0.19
DDX41-208ENST00000507955 KIAA1211LQ6NV74 962 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 PARM1Q6UWI2 310 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 CCDC81Q6ZN84 652 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 OLIG3Q7RTU3 272 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 ADCK2Q7Z695 626 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 LRRTM4Q86VH4 590 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 PGBD3Q8N328 593 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 ALPK1Q96QP1 1244 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 ZNF347Q96SE7 839 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 DOHHQ9BU89 302 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 ZNF717Q9BY31 904 aaPredicted RBP13.84□□□□□ -0.19
DDX41-208ENST00000507955 CXorf36Q9H7Y0 433 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 C1GALT1Q9NS00 363 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 B3GNT3Q9Y2A9 372 aa13.84□□□□□ -0.19
DDX41-208ENST00000507955 GABARAPO95166 117 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 CCDC159P0C7I6 412 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 ITGAMP11215 1152 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 RXRGP48443 463 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 ITGA1P56199 1179 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 RAB15P59190 212 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 SELENOWP63302 87 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 DGCR6Q14129 220 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 CST6Q15828 149 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 METRNLQ641Q3 311 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 TNFAIP8L2Q6P589 184 aaPredicted RBP13.83□□□□□ -0.19
DDX41-208ENST00000507955 HMGN2P46Q86SG4 172 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 SLC9B2Q86UD5 537 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 C17orf64Q86WR6 236 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 HOMEZQ8IX15 550 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 OR5K2Q8NHB8 316 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 STARD8Q92502 1023 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 RAB8BQ92930 207 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 ZNF566Q969W8 418 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 OTUB1Q96FW1 271 aaPredicted RBP13.83□□□□□ -0.19
DDX41-208ENST00000507955 FEVQ99581 238 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 MENTQ9BUN1 341 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 RSPO3Q9BXY4 272 aaPredicted RBP13.83□□□□□ -0.19
DDX41-208ENST00000507955 IMP3Q9NV31 184 aaKnown RBP13.83□□□□□ -0.19
DDX41-208ENST00000507955 ADPRHL2Q9NX46 363 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 TAS2R9Q9NYW1 312 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 DPP7Q9UHL4 492 aa13.83□□□□□ -0.19
DDX41-208ENST00000507955 ZFR2Q9UPR6 939 aaKnown RBP13.83□□□□□ -0.19
DDX41-208ENST00000507955 COL4A3Q01955 1670 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 ANKDD1BA6NHY2 528 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 PRAMEF10O60809 474 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 KELP23276 732 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 GDI1P31150 447 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 TGFBR1P36897 503 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 MAPK9P45984 424 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 CDH12P55289 794 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 RPP38P78345 283 aaKnown RBP13.83□□□□□ -0.2
DDX41-208ENST00000507955 HSPB3Q12988 150 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 TOP3AQ13472 1001 aaPredicted RBP13.83□□□□□ -0.2
DDX41-208ENST00000507955 PDE7AQ13946 482 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 IRF4Q15306 451 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 MLF2Q15773 248 aaPredicted RBP13.83□□□□□ -0.2
DDX41-208ENST00000507955 PERM1Q5SV97 790 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 NIPAL1Q6NVV3 410 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 SLCO6A1Q86UG4 719 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 DCUN1D3Q8IWE4 304 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 GANCQ8TET4 914 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 METTL2AQ96IZ6 378 aaKnown RBP13.83□□□□□ -0.2
DDX41-208ENST00000507955 BTBD2Q9BX70 525 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 HDAC8Q9BY41 377 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 MKRN2Q9H000 416 aaKnown RBP13.83□□□□□ -0.2
DDX41-208ENST00000507955 RAB23Q9ULC3 237 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 SLC6A14Q9UN76 642 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 KLHL20Q9Y2M5 609 aa13.83□□□□□ -0.2
DDX41-208ENST00000507955 SNRNP200O75643 2136 aaKnown RBP13.83□□□□□ -0.2
DDX41-208ENST00000507955 A0A1W2PPV9 198 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 GLOD5A6NK44 160 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 CLDN25C9JDP6 229 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 FAM227AF5H4B4 570 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 PCDHGA12O60330 932 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 PCGF2P35227 344 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 HNRNPFP52597 415 aaKnown RBP13.82□□□□□ -0.2
DDX41-208ENST00000507955 VBP1P61758 197 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 SLC35A2P78381 396 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 NPTX1Q15818 432 aa13.82□□□□□ -0.2
DDX41-208ENST00000507955 DUSP6Q16828 381 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms