RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	UGDH	O60701	494 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	WDPCP	O95876	746 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TSPAN8	P19075	237 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TAC1	P20366	129 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TNFRSF8	P28908	595 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	PIK3CB	P42338	1070 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	CDH13	P55290	713 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	RCN2	Q14257	317 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	OR4C11	Q6IEV9	310 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TMEM151A	Q8N4L1	468 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	L3MBTL4	Q8NA19	623 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ADAMTS18	Q8TE60	1221 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	RGMA	Q96B86	450 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	REPS1	Q96D71	796 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	CENPK	Q9BS16	269 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ZBTB26	Q9HCK0	441 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	MMP25	Q9NPA2	562 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	FBXW2	Q9UKT8	454 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	MMACHC	Q9Y4U1	282 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	PCDHGA10	Q9Y5H3	936 aa		13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	COPG1	Q9Y678	874 aa	Known RBP	13.26	□□□□□ -0.29
CCHCR1-222	ENST00000507459	IGKV3D-11	A0A0A0MRZ8	115 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459		A0A1W2PPM1	405 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TGFBR3L	H3BV60	316 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	CYR61	O00622	381 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	PPP6C	O00743	305 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	MYO1D	O94832	1006 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	HIST1H1T	P22492	207 aa	Predicted RBP	13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	GNLY	P22749	145 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	PTX3	P26022	381 aa	Predicted RBP	13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	PPP2R1B	P30154	601 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	UQCRFS1	P47985	274 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	HSD17B7	P56937	341 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TAS2R50	P59544	299 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SLAMF1	Q13291	335 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SGO1	Q5FBB7	561 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ACER2	Q5QJU3	275 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TTC19	Q6DKK2	380 aa	Predicted RBP	13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	MILR1	Q7Z6M3	343 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	CRLF3	Q8IUI8	442 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SCUBE1	Q8IWY4	988 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ZNF595	Q8IYB9	648 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	KIF2B	Q8N4N8	673 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	GALNT11	Q8NCW6	608 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ACMSD	Q8TDX5	336 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	HAS2	Q92819	552 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ZNF354B	Q96LW1	612 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	KCMF1	Q9P0J7	381 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SPACA6	W5XKT8	324 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TENM4	Q6N022	2769 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	RELN	P78509	3460 aa		13.25	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SHANK1	Q9Y566	2161 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SAGE2P	A6NJ88	616 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TCP11X1	B4DZS4	312 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	PLPP1	O14494	284 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ZNF500	O60304	480 aa	Predicted RBP	13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	MAN1A2	O60476	641 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	LDB3	O75112	727 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	IFNA16	P05015	189 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	RPS17	P08708	135 aa	Known RBP	13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	KRT15	P19012	456 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	CPN2	P22792	545 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TNFSF10	P50591	281 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	VSNL1	P62760	191 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TRAF3	Q13114	568 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	MEP1A	Q16819	746 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	H3F3C	Q6NXT2	135 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	BEST3	Q8N1M1	668 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SLC5A8	Q8N695	610 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	OR4F6	Q8NGB9	312 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	WDR20	Q8TBZ3	569 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	EPS8L3	Q8TE67	593 aa	Known RBP	13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ZNF483	Q8TF39	744 aa	Predicted RBP	13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	MZB1	Q8WU39	189 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	NTMT1	Q9BV86	223 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SLC29A3	Q9BZD2	475 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	CDCP1	Q9H5V8	836 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	LYRM4	Q9HD34	91 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ANKRD10	Q9NXR5	420 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	NTNG1	Q9Y2I2	539 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TSC22D4	Q9Y3Q8	395 aa		13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459		V9GYY5	206 aa	Predicted RBP	13.24	□□□□□ -0.29
CCHCR1-222	ENST00000507459	MYO18B	Q8IUG5	2567 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TRAV17	A0A0B4J275	112 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459		A0A1B0GTL3	188 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	OR5H15	A6NDH6	313 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	DLX3	O60479	287 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	CTNS	O60931	367 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SUPT7L	O94864	414 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	SLU7	O95391	586 aa	Known RBP	13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ETHE1	O95571	254 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	HSD17B3	P37058	310 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	TSFM	P43897	325 aa	Known RBP	13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	ID2	Q02363	134 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	STX4	Q12846	297 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	IFT88	Q13099	833 aa		13.23	□□□□□ -0.29
CCHCR1-222	ENST00000507459	NR6A1	Q15406	480 aa		13.23	□□□□□ -0.29

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