RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 NOCTQ9UK39 431 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 PRDM4Q9UKN5 801 aa2.8□□□□□ -1.96
RFC1-209ENST00000504974 HBS1LQ9Y450 684 aaKnown RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 ZFP37Q9Y6Q3 630 aaPredicted RBP2.8□□□□□ -1.96
RFC1-209ENST00000504974 CACNA1SQ13698 1873 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 IBTKQ9P2D0 1353 aaPredicted RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 IL16Q14005 1332 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 TRAV18A0A075B6X5 111 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 A8MVM7 634 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 C2CD4DB7Z1M9 353 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 KBTBD13C9JR72 458 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 RTCAO00442 366 aaKnown RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 PGRMC2O15173 223 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 SLC7A4O43246 635 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 STX6O43752 255 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 CRCPO75575 148 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 DUS4LO95620 317 aaKnown RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 GOT1P17174 413 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 ITIH1P19827 911 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 MT3P25713 68 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 TIA1P31483 386 aaKnown RBP eCLIP2.79□□□□□ -1.96
RFC1-209ENST00000504974 SOX3P41225 446 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 CLDN17P56750 224 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 ABRQ12979 859 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 IQCCQ4KMZ1 466 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 ANKRD20A4Q4UJ75 823 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 ANKRD20A8PQ5CZ79 823 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 ANKRD20A2Q5SQ80 823 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 CEP85LQ5SZL2 805 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 WLSQ5T9L3 541 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 ANKRD20A1Q5TYW2 823 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 ANKRD20A3Q5VUR7 823 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 BSPRYQ5W0U4 402 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 FIP1L1Q6UN15 594 aaKnown RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 PRSS55Q6UWB4 352 aaPredicted RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 LEKR1Q6ZMV7 388 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 GBP6Q6ZN66 633 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 CHMP1BQ7LBR1 199 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 CCDC91Q7Z6B0 441 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 IQCA1Q86XH1 822 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 MEX3DQ86XN8 651 aaKnown RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 CCDC60Q8IWA6 550 aaPredicted RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 CCDC170Q8IYT3 715 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 SMYD1Q8NB12 490 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 AFAP1L1Q8TED9 768 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 GATAD1Q8WUU5 269 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 NXPE2Q96DL1 559 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 SGF29Q96ES7 293 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 C2orf48Q96LS8 159 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 HNRNPABQ99729 332 aaKnown RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 ALKBH7Q9BT30 221 aaPredicted RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 NACAP1Q9BZK3 213 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 MMADHCQ9H3L0 296 aaPredicted RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 EGLN3Q9H6Z9 239 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 C3orf14Q9HBI5 128 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 TUFT1Q9NNX1 390 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.79□□□□□ -1.96
RFC1-209ENST00000504974 IL36AQ9UHA7 158 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 POMT2Q9UKY4 750 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 CDH7Q9ULB5 785 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 PLCL2Q9UPR0 1127 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 EXOGQ9Y2C4 368 aaKnown RBP2.79□□□□□ -1.96
RFC1-209ENST00000504974 KLK4Q9Y5K2 254 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 USP16Q9Y5T5 823 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 SELENOKQ9Y6D0 94 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 CACNA1FO60840 1977 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 SLX4Q8IY92 1834 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 LAMB2P55268 1798 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 LTBP1Q14766 1721 aa2.79□□□□□ -1.96
RFC1-209ENST00000504974 RANBP2P49792 3224 aaKnown RBP2.78□□□□□ -1.96
RFC1-209ENST00000504974 RIC1Q4ADV7 1423 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 MAP3K15Q6ZN16 1313 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 A0A087X002 238 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 FAM170AA1A519 330 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 OOEPA6NGQ2 149 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 KIF5CO60282 957 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 CYTIPO60759 359 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 KHDRBS3O75525 346 aaKnown RBP2.78□□□□□ -1.96
RFC1-209ENST00000504974 IGHEP01854 428 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 YES1P07947 543 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 HOXB7P09629 217 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 AADACP22760 399 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 RBMS1P29558 406 aaKnown RBP2.78□□□□□ -1.96
RFC1-209ENST00000504974 TSFMP43897 325 aaKnown RBP2.78□□□□□ -1.96
RFC1-209ENST00000504974 OR3A2P47893 321 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 PMP22Q01453 160 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 GUCY2DQ02846 1103 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 DRP2Q13474 957 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 RCN2Q14257 317 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 SLMAPQ14BN4 828 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 EFTUD2Q15029 972 aaKnown RBP eCLIP2.78□□□□□ -1.96
RFC1-209ENST00000504974 MRGPRG-AS1Q2M3A8 158 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 CCDC184Q52MB2 194 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 C1QTNF12Q5T7M4 302 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 CES4AQ5XG92 561 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 PODNL1Q6PEZ8 512 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 KIF6Q6ZMV9 814 aa2.78□□□□□ -1.96
RFC1-209ENST00000504974 CPEB2Q7Z5Q1 589 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms